RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CYSRT1A8MQ03 144 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 INMT-MINDY4F8WBC2 141 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC28A1O00337 649 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 NR5A2O00482 541 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SYN3O14994 580 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ANKRD28O15084 1053 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 MSH4O15457 936 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PRKYO43930 277 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC19A2O60779 497 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PRAF2O60831 178 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 C9P02748 559 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 MT-ND2P03891 347 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 FGF4P08620 206 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 HBQ1P09105 142 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SBK2P0C263 348 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC2A2P11168 524 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ODC1P11926 461 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 GJA1P17302 382 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 LBPP18428 481 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 CBLP22681 906 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PAX6P26367 422 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 OXTRP30559 389 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ACSL1P33121 698 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RFC3P40938 356 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 CASP2P42575 452 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RPL35P42766 123 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RGS6P49758 472 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 NAGLUP54802 743 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 LSM3P62310 102 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 DYNLT1P63172 113 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PSPHP78330 225 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 EMX2Q04743 252 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 LTBQ06643 244 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RPA4Q13156 261 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 TDGQ13569 410 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 EXOSC2Q13868 293 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 COTL1Q14019 142 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RCAN2Q14206 197 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 HNF4GQ14541 408 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 VEPH1Q14D04 833 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 MAD2L1BPQ15013 274 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PON3Q15166 354 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SSX2Q16385 188 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 CCL14Q16627 93 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 GUCA2BQ16661 112 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 KYAT1Q16773 422 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 AP5B1Q2VPB7 878 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ARHGAP15Q53QZ3 475 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 LAMTOR1Q6IAA8 161 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC25A25Q6KCM7 469 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM180BQ6P0A1 224 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 BHLHB9Q6PI77 547 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 TMEM107Q6UX40 140 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 UNC5DQ6UXZ4 953 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM183BPQ6ZVS7 135 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 TRILQ7L0X0 811 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SHFQ7M4L6 423 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PTAR1Q7Z6K3 402 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ZER1Q7Z7L7 766 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ZC3HC1Q86WB0 502 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 DENND6AQ8IWF6 608 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PDZD9Q8IXQ8 264 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ADGRF3Q8IZF5 1079 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 GPD1LQ8N335 351 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 WDSUB1Q8N9V3 476 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 IL17RCQ8NAC3 791 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 DENND6BQ8NEG7 585 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 OR4M1Q8NGD0 313 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 AGR3Q8TD06 166 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 TCTEX1D2Q8WW35 142 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ACOT12Q8WYK0 555 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RFT1Q96AA3 541 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 NSUN4Q96CB9 384 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RHBDF1Q96CC6 855 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 TBATAQ96M53 351 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RNF157Q96PX1 679 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC38A2Q96QD8 506 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 MBOAT4Q96T53 435 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 GPR22Q99680 433 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PITX2Q99697 317 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PIP5K1AQ99755 562 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 HSD17B14Q9BPX1 270 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ABHD14AQ9BUJ0 271 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ALX4Q9H161 411 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 MINDY3Q9H8M7 445 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC28A3Q9HAS3 691 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 CHRAC1Q9NRG0 131 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SDR39U1Q9NRG7 319 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 C19orf12Q9NSK7 152 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 HCN3Q9P1Z3 774 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 MYEF2Q9P2K5 600 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SPASTQ9UBP0 616 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 AASSQ9UDR5 926 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 RPS6KA6Q9UK32 745 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 MGAT4AQ9UM21 535 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SSR3Q9UNL2 185 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SAMD4AQ9UPU9 718 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 PADI2Q9Y2J8 665 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms