RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 HIST1H2AGP0C0S8 130 aaPredicted RBP1.34□□□□□ -2.19
CLOCK-207ENST00000508049 TSPY4P0CV99 314 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 TSPY10P0CW01 314 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 UQCRC2P22695 453 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 RPL4P36578 427 aaKnown RBP1.34□□□□□ -2.19
CLOCK-207ENST00000508049 IL9RQ01113 521 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 ZNF674Q2M3X9 581 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 CCDC57Q2TAC2 916 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 MPP7Q5T2T1 576 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 PET117Q6UWS5 81 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 ACP7Q6ZNF0 438 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.34□□□□□ -2.19
CLOCK-207ENST00000508049 THNSL1Q8IYQ7 743 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 P3H4Q92791 437 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 HIST1H2ACQ93077 130 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 UCN3Q969E3 161 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 ULBP2Q9BZM5 246 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 ZNF350Q9GZX5 532 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 CAB39LQ9H9S4 337 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 FAM114A2Q9NRY5 505 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 ZNF586Q9NXT0 402 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 DCDC2Q9UHG0 476 aa1.34□□□□□ -2.19
CLOCK-207ENST00000508049 COL27A1Q8IZC6 1860 aaPredicted RBP1.34□□□□□ -2.19
CLOCK-207ENST00000508049 BET1O15155 118 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 HCN1O60741 890 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 RHOXF2BP0C7M4 288 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 THRBP10828 461 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 NPY2RP49146 381 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 TFCP2Q12800 502 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 ARFRP1Q13795 201 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 CCDC158Q5M9N0 1113 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 KCTD11Q693B1 232 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 HIST2H2AA3Q6FI13 130 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 PNCKQ6P2M8 343 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 C16orf54Q6UWD8 224 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 UNC5DQ6UXZ4 953 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 DPY19L2P2Q6ZN68 376 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 CENPSQ8N2Z9 138 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 LINC00304Q8N9R0 145 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 MLKLQ8NB16 471 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 AENQ8WTP8 325 aaKnown RBP1.33□□□□□ -2.2
CLOCK-207ENST00000508049 RASL11BQ9BPW5 248 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 HDHD3Q9BSH5 251 aaPredicted RBP1.33□□□□□ -2.2
CLOCK-207ENST00000508049 POLR2J2Q9GZM3 115 aaKnown RBP1.33□□□□□ -2.2
CLOCK-207ENST00000508049 POLR2J3Q9H1A7 115 aaKnown RBP1.33□□□□□ -2.2
CLOCK-207ENST00000508049 MAGEF1Q9HAY2 307 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 RBM28Q9NW13 759 aaKnown RBP1.33□□□□□ -2.2
CLOCK-207ENST00000508049 ANKMY1Q9P2S6 941 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 MTRF1LQ9UGC7 380 aaKnown RBP1.33□□□□□ -2.2
CLOCK-207ENST00000508049 ZNF229Q9UJW7 825 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 SAMD4AQ9UPU9 718 aaKnown RBP1.33□□□□□ -2.2
CLOCK-207ENST00000508049 MRPS2Q9Y399 296 aaKnown RBP1.33□□□□□ -2.2
CLOCK-207ENST00000508049 TTLL3Q9Y4R7 772 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 MMACHCQ9Y4U1 282 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 RFNGQ9Y644 331 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 METP08581 1390 aa1.33□□□□□ -2.2
CLOCK-207ENST00000508049 NUP214P35658 2090 aaPredicted RBP1.32□□□□□ -2.2
CLOCK-207ENST00000508049 KAT6BQ8WYB5 2073 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 FAM189A1O60320 539 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 COX7A1P24310 79 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 RFC2P35250 354 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 SH3BGRP55822 239 aaPredicted RBP1.32□□□□□ -2.2
CLOCK-207ENST00000508049 ZNF154Q13106 437 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 LY6G6FQ5SQ64 297 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 SHQ1Q6PI26 577 aaKnown RBP1.32□□□□□ -2.2
CLOCK-207ENST00000508049 SERPINA9Q86WD7 417 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 ATAD1Q8NBU5 361 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 TMEM37Q8WXS4 190 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 MR1Q95460 341 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 RPUSD4Q96CM3 377 aaKnown RBP1.32□□□□□ -2.2
CLOCK-207ENST00000508049 C5orf30Q96GV9 206 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 GPR137Q96N19 417 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 OSBPL11Q9BXB4 747 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 DNAJC17Q9NVM6 304 aaKnown RBP1.32□□□□□ -2.2
CLOCK-207ENST00000508049 BTNL2Q9UIR0 455 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 NEUROG3Q9Y4Z2 214 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 UBIAD1Q9Y5Z9 338 aa1.32□□□□□ -2.2
CLOCK-207ENST00000508049 MYO16Q9Y6X6 1858 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 TRAV40A0A0B4J280 105 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 LAD1O00515 517 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 ARPC1BO15143 372 aaKnown RBP1.31□□□□□ -2.2
CLOCK-207ENST00000508049 OR10H3O60404 316 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 APOA4P06727 396 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 LIM2P55344 173 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 ST8SIA6P61647 398 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 VLDLRP98155 873 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 ZNF789Q5FWF6 425 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 HACD2Q6Y1H2 254 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 COX15Q7KZN9 410 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 OR2T33Q8NG76 320 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 OR4A16Q8NH70 328 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 MLPHQ9BV36 600 aaPredicted RBP1.31□□□□□ -2.2
CLOCK-207ENST00000508049 MAF1Q9H063 256 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 RNPEPL1Q9HAU8 725 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 NARFQ9UHQ1 456 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 YTHDF2Q9Y5A9 579 aaKnown RBP1.31□□□□□ -2.2
CLOCK-207ENST00000508049 FKBP7Q9Y680 259 aa1.31□□□□□ -2.2
CLOCK-207ENST00000508049 KIAA0754O94854 1291 aa1.3□□□□□ -2.2
CLOCK-207ENST00000508049 SNAPINO95295 136 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms