RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 IL18R1Q13478 541 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 DDX39BQ13838 428 aaKnown RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 ATP6AP1Q15904 470 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 C3AR1Q16581 482 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 GGTA1PQ4G0N0 100 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 LIPMQ5VYY2 423 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 FRG2Q64ET8 278 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 NXNQ6DKJ4 435 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SIGIRRQ6IA17 410 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 GALNT18Q6P9A2 607 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PAOXQ6QHF9 649 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 CYP20A1Q6UW02 462 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 IL20RBQ6UXL0 311 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 RTL4Q6ZR62 310 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 KCTD8Q6ZWB6 473 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 USP51Q70EK9 711 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 DOLPP1Q86YN1 238 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 DND1Q8IYX4 353 aaKnown RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 CADM3Q8N126 398 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PTGR2Q8N8N7 351 aaPredicted RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SUN5Q8TC36 379 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SLC2A12Q8TD20 617 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF721Q8TF20 911 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 ITLN2Q8WWU7 325 aaPredicted RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 ASB15Q8WXK1 588 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 TMIGD2Q96BF3 282 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PPWD1Q96BP3 646 aaKnown RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 FBXL20Q96IG2 436 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 MAELQ96JY0 434 aaKnown RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 DGAT2Q96PD7 388 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 FRG2BQ96QU4 278 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 RASL10BQ96S79 203 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 TRMOQ9BU70 441 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 OR8D2Q9GZM6 311 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 HOXD1Q9GZZ0 328 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 NANOGQ9H9S0 305 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 CHST11Q9NPF2 352 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 FKBP14Q9NWM8 211 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PAK1IP1Q9NWT1 392 aaPredicted RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 HPF1Q9NWY4 346 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 COPS7AQ9UBW8 275 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 PCTPQ9UKL6 214 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 EIF3LQ9Y262 564 aaKnown RBP7.4□□□□□ -1.22
SCN1A-207ENST00000507401 TRAF6Q9Y4K3 522 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 SNX13Q9Y5W8 968 aa7.4□□□□□ -1.22
SCN1A-207ENST00000507401 CACNA1DQ01668 2161 aa7.4□□□□□ -1.23
SCN1A-207ENST00000507401 CROCCQ5TZA2 2017 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 A0A0A6YYD5 115 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 RNF103-CHMP3A0A140T963 221 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 PNMA8CA0A1B0GUJ8 204 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 A0A1W2PR48 441 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 LRRC14BA6NHZ5 514 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 E9PLN8 166 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 WWP2O00308 870 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 UGT2B11O75310 529 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 GUCY1B2O75343 617 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 NPPAP01160 153 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 APOA1P02647 267 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 SLC35E2P0CK97 266 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 ABOP16442 354 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 EPHA3P29320 983 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 HPCAL1P37235 193 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 SOX3P41225 446 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 PLIN5Q00G26 463 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 PMS2P3Q13401 168 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF630Q2M218 657 aaPredicted RBP7.39□□□□□ -1.23
SCN1A-207ENST00000507401 HYAL4Q2M3T9 481 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 RFX4Q33E94 735 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 FGD3Q5JSP0 725 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 NDUFAF5Q5TEU4 345 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 C18orf63Q68DL7 685 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 GTF2IRD2BQ6EKJ0 949 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 LCN8Q6JVE9 175 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 OGFOD2Q6N063 350 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF544Q6NX49 715 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 ARHGAP11AQ6P4F7 1023 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 PAGE2Q7Z2X7 111 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 MAVSQ7Z434 540 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 MILR1Q7Z6M3 343 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 GTF2IRD2Q86UP8 949 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 NUDT13Q86X67 352 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 C10orf107Q8IVU9 208 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 OR4N5Q8IXE1 308 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 CLYBLQ8N0X4 340 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 RNF175Q8N4F7 328 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 PAPD5Q8NDF8 572 aaKnown RBP7.39□□□□□ -1.23
SCN1A-207ENST00000507401 PSD4Q8NDX1 1056 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 OR52B6Q8NGF0 335 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 NUDT8Q8WV74 236 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 RIT1Q92963 219 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 TP53INP1Q96A56 240 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 VPS33AQ96AX1 596 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 RCN3Q96D15 328 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 PHF21BQ96EK2 531 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 AURKBQ96GD4 344 aaPredicted RBP7.39□□□□□ -1.23
SCN1A-207ENST00000507401 SCYL1Q96KG9 808 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 VKORC1Q9BQB6 163 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 BDH2Q9BUT1 245 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 SORBS1Q9BX66 1292 aaKnown RBP7.39□□□□□ -1.23
SCN1A-207ENST00000507401 C20orf27Q9GZN8 174 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms