RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 LRRC75A-AS1Q8N1F1 130 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 CDRT4Q8N9R6 151 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 NUP43Q8NFH3 380 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 OR4C3Q8NH37 302 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 CEP70Q8NHQ1 597 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 CLHC1Q8NHS4 586 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 EPS8L3Q8TE67 593 aaKnown RBP10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 UBLCP1Q8WVY7 318 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 GIMAP5Q96F15 307 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 ZBED6CLQ96FA7 236 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 OTUB1Q96FW1 271 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 MARK4Q96L34 752 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 FCRL1Q96LA6 429 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 MS4A4EQ96PG1 132 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 CCL19Q99731 98 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 NPAS1Q99742 590 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 PIP5K1AQ99755 562 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 PRRG4Q9BZD6 226 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 KLHL4Q9C0H6 718 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 TUBB1Q9H4B7 451 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 REEP4Q9H6H4 257 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF395Q9H8N7 513 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 SH3BP4Q9P0V3 963 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 CLEC4AQ9UMR7 237 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 ZFHX3Q15911 3703 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 A0A1W2PRB8 838 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 ALG1L2C9J202 215 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 TBX19O60806 448 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 PLGP00747 810 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 OPN1LWP04000 364 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 NGFRP08138 427 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 LINC00032P0C843 101 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 NEFHP12036 1026 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 EFNA1P20827 205 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 FPR1P21462 350 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 TBXA2RP21731 343 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 LOXP28300 417 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 FRKP42685 505 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 MANFP55145 182 aaKnown RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 SLC18A2Q05940 514 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 PDE7AQ13946 482 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 PCLAFQ15004 111 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 DUSP5Q16690 384 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 CTU2Q2VPK5 515 aaKnown RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 RFTN2Q52LD8 501 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 KANK2Q63ZY3 851 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 CLEC9AQ6UXN8 241 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 C22orf34Q6ZV56 151 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 TDRPQ86YL5 185 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 C10orf107Q8IVU9 208 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 WDR75Q8IWA0 830 aaKnown RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 C4orf33Q8N1A6 199 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 SLC16A11Q8NCK7 471 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 LRRN4CLQ8ND94 238 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 OR6K3Q8NGY3 331 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 OR10D3Q8NH80 312 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 PIGTQ969N2 578 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 KLHDC3Q9BQ90 382 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 GATA5Q9BWX5 397 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 IQCGQ9H095 443 aaKnown RBP10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 MED17Q9NVC6 651 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 STOML1Q9UBI4 398 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 BAIAP2L1Q9UHR4 511 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 MID2Q9UJV3 735 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 EMC9Q9Y3B6 208 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 ARID1AO14497 2285 aa10.35□□□□□ -0.75
HMGCS1-204ENST00000507293 A0A087WZY1 265 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 CXCL13O43927 109 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 SS18L1O75177 396 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 KCNK2O95069 426 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 CHEK2O96017 543 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 THBDP07204 575 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 ALOX5P09917 674 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 HPGDP15428 266 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 KRT4P19013 534 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 PSMA4P25789 261 aaKnown RBP10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF41P51814 821 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 CTBP2P56545 445 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 PLPPR5Q32ZL2 321 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 GALNTL6Q49A17 601 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 CCNJQ5T5M9 372 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 MFSD12Q6NUT3 480 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 C20orf204Q6ZNR8 217 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 RNF165Q6ZSG1 346 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 GTPBP8Q8N3Z3 284 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 COX18Q8N8Q8 333 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 OR6Y1Q8NGX8 325 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 FAM110BQ8TC76 370 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 JADE3Q92613 823 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 CAVIN3Q969G5 261 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 ZBTB8AQ96BR9 441 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 PERPQ96FX8 193 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 C16orf58Q96GQ5 468 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 SH3YL1Q96HL8 342 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 GMPPAQ96IJ6 420 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 ADGRG7Q96K78 797 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 Q96MF0 132 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 RNF145Q96MT1 663 aa10.34□□□□□ -0.75
HMGCS1-204ENST00000507293 TMEM185BQ9H7F4 350 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms