RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 HPCAP84074 193 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 CDK6Q00534 326 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 MAPK14Q16539 360 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF630Q2M218 657 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 RNFT1Q5M7Z0 435 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF324BQ6AW86 544 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 TIGD3Q6B0B8 471 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 C6orf89Q6UWU4 347 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 PACS2Q86VP3 889 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 ZZZ3Q8IYH5 903 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 CISD2Q8N5K1 135 aaKnown RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 WDSUB1Q8N9V3 476 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF527Q8NB42 609 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 NFKBIDQ8NI38 313 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 SNRNP40Q96DI7 357 aaKnown RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 TREX2Q9BQ50 279 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 ECSITQ9BQ95 431 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 TTTY12Q9BZ98 90 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 TBL1XR1Q9BZK7 514 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 PIEZO2Q9H5I5 2752 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 SUCOQ9UBS9 1254 aaKnown RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 BOKQ9UMX3 212 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 AP3M1Q9Y2T2 418 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 DTNAQ9Y4J8 743 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 HRH3Q9Y5N1 445 aa11.73□□□□□ -0.53
TCOF1-210ENST00000506767 SPENQ96T58 3664 aaKnown RBP11.73□□□□□ -0.53
TCOF1-210ENST00000506767 NINQ8N4C6 2090 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 IGLV3-32A0A0A0MS00 114 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 AGAP5A6NIR3 686 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 B8ZZF3 427 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 NME4O00746 187 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 SCDO00767 359 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 NDUFB5O43674 189 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 SCO2O43819 266 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 UBOX5O94941 541 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 PGM3O95394 542 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
TCOF1-210ENST00000506767 RFPL3SP0C7P2 107 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 ELAVL4P26378 380 aaKnown RBP11.72□□□□□ -0.53
TCOF1-210ENST00000506767 CPOXP36551 454 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 SLC7A2P52569 658 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 SLC25A3Q00325 362 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 C17orf67Q0P5P2 114 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 SCARB2Q14108 478 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 FGFBP1Q14512 234 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 CYP51A1Q16850 503 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 VMACQ2NL98 169 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 PDZK1Q5T2W1 519 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 REEP3Q6NUK4 255 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 MISPQ8IVT2 679 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 PGAM4Q8N0Y7 254 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 C11orf65Q8NCR3 313 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 OR1J4Q8NGS1 313 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 BBS10Q8TAM1 723 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 FAR1Q8WVX9 515 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 REXO5Q96IC2 774 aaKnown RBP11.72□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF597Q96LX8 424 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 QRSL1Q9H0R6 528 aaKnown RBP11.72□□□□□ -0.53
TCOF1-210ENST00000506767 UBQLN3Q9H347 655 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 SDHAF3Q9NRP4 125 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 TMEM181Q9P2C4 612 aa11.72□□□□□ -0.53
TCOF1-210ENST00000506767 NCKAP5O14513 1909 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 SERINC4A6NH21 518 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 TTLL8A6PVC2 850 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 C17orf51A8MQB3 221 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 FAM220BPB1ANY3 271 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 B2RBV5 119 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 C5orf58C9J3I9 102 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 GNB5O14775 395 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 GCM2O75603 506 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 CBR3O75828 277 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 DBIP07108 87 aaKnown RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 ETS2P15036 469 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 HPGDP15428 266 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 RFC3P40938 356 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 PCBP3P57721 371 aaKnown RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 EEFSECP57772 596 aaKnown RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 CD226Q15762 336 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 PRR30Q53SZ7 412 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 RPS26P11Q5JNZ5 115 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 ERICH5Q6P6B1 374 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 FAM180AQ6UWF9 173 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 BNC2Q6ZN30 1099 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 PLCZ1Q86YW0 608 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 SIAH3Q8IW03 269 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 SLC30A8Q8IWU4 369 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 TMEM251Q8N6I4 163 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 FADS6Q8N9I5 356 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 RBM15BQ8NDT2 890 aaKnown RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 HIPK4Q8NE63 616 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 DUSP19Q8WTR2 217 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 GNRHR2Q96P88 292 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 RSPO3Q9BXY4 272 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 C1orf21Q9H246 121 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 PIF1Q9H611 641 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 ZNF703Q9H7S9 590 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 ZDHHC11Q9H8X9 412 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 HHATLQ9HCP6 504 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 SPAG4Q9NPE6 437 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 ASF1BQ9NVP2 202 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms