RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 C15orf38-AP3S2A0A0A6YYH1 394 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 DUXAA6NLW8 204 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 HMGN4O00479 90 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 FCMRO60667 390 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 ZCCHC18P0CG32 403 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 TROVE2P10155 538 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 CLK3P49761 638 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 PER3P56645 1201 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 IRX1P78414 480 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 ADORA2A-AS1P86434 159 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 ARHGAP11BQ3KRB8 267 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 FLYWCH1Q4VC44 716 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 NHSL2Q5HYW2 709 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 C6orf10Q5SRN2 563 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 XAGE5Q8WWM1 108 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 SARAFQ96BY9 339 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 PSMG3-AS1Q96PY0 264 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 KLHDC3Q9BQ90 382 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 UGT2B28Q9BY64 529 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 ZNF350Q9GZX5 532 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 TP63Q9H3D4 680 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 SDHAF3Q9NRP4 125 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 TMEM45AQ9NWC5 275 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 TAS2R10Q9NYW0 307 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 KCNE5Q9UJ90 142 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 DKKL1Q9UK85 242 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 ACAD8Q9UKU7 415 aa16.57■□□□□ 0.24
PDLIM7-216ENST00000506537 CENPVL1A0A0U1RR11 272 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 A0A1W2PQD3 144 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 E9PLN8 166 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 SCDO00767 359 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 DYNC1I1O14576 645 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 NDUFB5O43674 189 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 ZIC3O60481 467 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 AK1P00568 194 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 BMP7P18075 431 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 TCEA1P23193 301 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 DPP4P27487 766 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 GFRA1P56159 465 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 C17orf67Q0P5P2 114 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 KLHL26Q53HC5 615 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 PAGE3Q5JUK9 113 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 VASNQ6EMK4 673 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 RTL6Q6ICC9 239 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 C16orf62Q7Z3J2 963 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 MSRB3Q8IXL7 192 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 OR14L1PQ8NHC6 308 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 C1GALT1C1Q96EU7 318 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 TIMP4Q99727 224 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 VKORC1Q9BQB6 163 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 EXD2Q9NVH0 621 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 TRIM33Q9UPN9 1127 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 MRPS18CQ9Y3D5 142 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 FAM215AQ9Y5M1 114 aa16.56■□□□□ 0.24
PDLIM7-216ENST00000506537 SPTBN1Q01082 2364 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 OIP5O43482 229 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 GMFGO60234 142 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 KIAA0513O60268 411 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 TNFRSF21O75509 655 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 AGR2O95994 175 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 ESRRAP11474 423 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 ATP12AP54707 1039 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 DSCR4P56555 118 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 B3GALT5-AS1P59052 145 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 LRIF1Q5T3J3 769 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 WLSQ5T9L3 541 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 TYW3Q6IPR3 259 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 ZNF585AQ6P3V2 769 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 FRRS1Q6ZNA5 592 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 ITLN2Q8WWU7 325 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 ROPN1LQ96C74 230 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 NMUR2Q9GZQ4 415 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 TPT1P8Q9HAU6 139 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 SLC25A37Q9NYZ2 338 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 SLAMF8Q9P0V8 285 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 SUCOQ9UBS9 1254 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 MKLN1Q9UL63 735 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 RPH3AQ9Y2J0 694 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 PCDHB14Q9Y5E9 798 aa16.55■□□□□ 0.24
PDLIM7-216ENST00000506537 A0A096LPI6 279 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 STX11O75558 287 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 ANP32DO95626 131 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 KRT75O95678 551 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 HPGDP15428 266 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 ARFIP2P53365 341 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 GANABQ14697 944 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 GPR68Q15743 365 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 MAPK11Q15759 364 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 SYPL1Q16563 259 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 PDZK1Q5T2W1 519 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 ATAD3BQ5T9A4 648 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 METTL21CQ5VZV1 264 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 ARSKQ6UWY0 536 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 IFNEQ86WN2 208 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 ULK2Q8IYT8 1036 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 ANKFN1Q8N957 763 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 PHF10Q8WUB8 498 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 ABTB1Q969K4 478 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 SH3YL1Q96HL8 342 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 PRDM14Q9GZV8 571 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms