RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 LEMD1Q68G75 181 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 RAET1GQ6H3X3 334 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 IRGCQ6NXR0 463 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 ARMCX5Q6P1M9 558 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 SLC25A42Q86VD7 318 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 RNF148Q8N7C7 305 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 ANKRD20A12PQ8NF67 263 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 OR56B1Q8NGI3 324 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 ARNTL2Q8WYA1 636 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 BIRC7Q96CA5 298 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 MRPL38Q96DV4 380 aaKnown RBP4.73□□□□□ -1.65
HERC4-213ENST00000506515 TGS1Q96RS0 853 aaKnown RBP4.73□□□□□ -1.65
HERC4-213ENST00000506515 NDUFAF3Q9BU61 184 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 APOOQ9BUR5 198 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 UBXN6Q9BZV1 441 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 API5Q9BZZ5 524 aaKnown RBP4.73□□□□□ -1.65
HERC4-213ENST00000506515 NGBQ9NPG2 151 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 BCAP29Q9UHQ4 241 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 EMCNQ9ULC0 261 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 KLF2Q9Y5W3 355 aaPredicted RBP4.73□□□□□ -1.65
HERC4-213ENST00000506515 RFX7Q2KHR2 1363 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 WDFY4Q6ZS81 3184 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 CHD7Q9P2D1 2997 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 A0A0J9YVX5 310 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 PDGFBP01127 241 aaPredicted RBP4.72□□□□□ -1.65
HERC4-213ENST00000506515 HOXD4P09016 255 aaPredicted RBP4.72□□□□□ -1.65
HERC4-213ENST00000506515 ARF4P18085 180 aaPredicted RBP4.72□□□□□ -1.65
HERC4-213ENST00000506515 CHRNA3P32297 505 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 ASMTP46597 345 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 SGSHP51688 502 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 PCK2Q16822 640 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 REP15Q6BDI9 236 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 APOOLQ6UXV4 268 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 TMUB2Q71RG4 321 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 GTSCR1Q86UQ5 136 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 GPBP1Q86WP2 473 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 ZNF491Q8N8L2 437 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 ZNF397Q8NF99 534 aaPredicted RBP4.72□□□□□ -1.65
HERC4-213ENST00000506515 DQX1Q8TE96 717 aaKnown RBP4.72□□□□□ -1.65
HERC4-213ENST00000506515 CPXM1Q96SM3 734 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 KCNK16Q96T55 309 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 GPR174Q9BXC1 333 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 CRNKL1Q9BZJ0 848 aaKnown RBP4.72□□□□□ -1.65
HERC4-213ENST00000506515 TRIM6Q9C030 488 aaPredicted RBP4.72□□□□□ -1.65
HERC4-213ENST00000506515 UBE2ZQ9H832 354 aaPredicted RBP4.72□□□□□ -1.65
HERC4-213ENST00000506515 VCPKMTQ9H867 229 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 ZNF446Q9NWS9 450 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 ACTR3BQ9P1U1 418 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 FKBP7Q9Y680 259 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 A0A1B0GUL6 1792 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 ZDBF2Q9HCK1 2354 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 CHD9Q3L8U1 2897 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 FRMPD3Q5JV73 1810 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 ATAD5Q96QE3 1844 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 SYNRGQ9UMZ2 1314 aa4.72□□□□□ -1.65
HERC4-213ENST00000506515 H3BMH7 237 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 MCF2LO15068 1137 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 BUB1O43683 1085 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 RANBP6O60518 1105 aaKnown RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 B3GALNT1O75752 331 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 SNAI1O95863 264 aaPredicted RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 CA3P07451 260 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 GP9P14770 177 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 SHC1P29353 583 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 NOP14P78316 857 aaKnown RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 COX10Q12887 443 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 CYLC2Q14093 348 aaPredicted RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 PDIA5Q14554 519 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 SMC1AQ14683 1233 aaKnown RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 LPAL2Q16609 132 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 ZNF506Q5JVG8 444 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 RFWD3Q6PCD5 774 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 ABRAXAS1Q6UWZ7 409 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 GOLGA7Q7Z5G4 137 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 LRRC49Q8IUZ0 686 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 CCDC51Q96ER9 411 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 C14orf79Q96F83 325 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 RBM18Q96H35 190 aaKnown RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 ST6GALNAC5Q9BVH7 336 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 RAB11FIP5Q9BXF6 653 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 NMNAT2Q9BZQ4 307 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 ALG9Q9H6U8 611 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 ROPN1Q9HAT0 212 aaPredicted RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 RCOR3Q9P2K3 495 aaPredicted RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 MRPL11Q9Y3B7 192 aaKnown RBP4.71□□□□□ -1.66
HERC4-213ENST00000506515 CFAP54Q96N23 3096 aa4.71□□□□□ -1.66
HERC4-213ENST00000506515 ZNF236Q9UL36 1845 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 CACNA1AO00555 2505 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 FOXI3A8MTJ6 420 aaPredicted RBP4.7□□□□□ -1.66
HERC4-213ENST00000506515 STK17BO94768 372 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 ECDO95905 644 aaPredicted RBP4.7□□□□□ -1.66
HERC4-213ENST00000506515 IGHG3P01860 377 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 ACADSP16219 412 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 FUT1P19526 365 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 SAA4P35542 130 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 CCL23P55773 120 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 ZNF699Q32M78 642 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 ACER2Q5QJU3 275 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 FAM219BQ5XKK7 198 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 RANBP3LQ86VV4 465 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms