RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 LRR1Q96L50 414 aa16.02■□□□□ 0.16
TRAPPC11-204ENST00000505676 ZNF582Q96NG8 517 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC11-204ENST00000505676 CDX2Q99626 313 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC11-204ENST00000505676 MGLLQ99685 303 aa16.02■□□□□ 0.16
TRAPPC11-204ENST00000505676 SIAEQ9HAT2 523 aa16.02■□□□□ 0.16
TRAPPC11-204ENST00000505676 FBXO8Q9NRD0 319 aa16.02■□□□□ 0.16
TRAPPC11-204ENST00000505676 SLC6A14Q9UN76 642 aa16.02■□□□□ 0.16
TRAPPC11-204ENST00000505676 IGHV1OR21-1A0A087WYE8 117 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 HTR3EA5X5Y0 456 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 KDM4EB2RXH2 506 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 TMX2-CTNND1H3BSU7 103 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 M0R129 80 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 SCG5P05408 212 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 IGFBP1P08833 259 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 GFERP55789 205 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 PRKCDQ05655 676 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 ZP2Q05996 745 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 ACSM5Q6NUN0 579 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 AMER2Q8N7J2 671 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 POGLUT1Q8NBL1 392 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR2T33Q8NG76 320 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 TMEM239Q8WW34 195 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 PLEKHA8Q96JA3 519 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 CCNL2Q96S94 520 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 FGF20Q9NP95 211 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 ISYNA1Q9NPH2 558 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 CUTCQ9NTM9 273 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 CHCHD3Q9NX63 227 aaKnown RBP16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 CCDC59Q9P031 241 aaKnown RBP16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 OSGIN1Q9UJX0 560 aa16.02■□□□□ 0.15
TRAPPC11-204ENST00000505676 CLDN25C9JDP6 229 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 TOX3O15405 576 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 ENDOUP21128 410 aaKnown RBP16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 CD1CP29017 333 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 LCN1P31025 176 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 CSNK1EP49674 416 aaKnown RBP16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 CTBP2P56545 445 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 VBP1P61758 197 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 FIGNL1Q6PIW4 674 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR52L1Q8NGH7 329 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 HOXD1Q9GZZ0 328 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 FN3KQ9H479 309 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 EXOSC1Q9Y3B2 195 aaKnown RBP16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 SIT1Q9Y3P8 196 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 PCDHGA3Q9Y5H0 932 aa16.01■□□□□ 0.15
TRAPPC11-204ENST00000505676 GXYLT2A0PJZ3 443 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 TMEM150CB9EJG8 249 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 STK25O00506 426 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 MYL12BO14950 172 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 CHP2O43745 196 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 RCBTB2O95199 551 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 MED26O95402 600 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 THY1P04216 161 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 PNLIPP16233 465 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 MYL12AP19105 171 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 ARRB1P49407 418 aaPredicted RBP16■□□□□ 0.15
TRAPPC11-204ENST00000505676 MED22Q15528 200 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 SYT16Q17RD7 645 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 PGGHGQ32M88 737 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 WDR74Q6RFH5 385 aaPredicted RBP16■□□□□ 0.15
TRAPPC11-204ENST00000505676 TMPRSS11FQ6ZWK6 438 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 D2HGDHQ8N465 521 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 IQCF1Q8N6M8 205 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 NANOGP1Q8N7R0 232 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 LSMEM1Q8N8F7 131 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 TMEM255BQ8WV15 326 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 PRSS27Q9BQR3 290 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 EGLN3Q9H6Z9 239 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 CNIH4Q9P003 139 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 SEC14L4Q9UDX3 406 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 KCNE5Q9UJ90 142 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 BAIAP2Q9UQB8 552 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 LSM2Q9Y333 95 aaKnown RBP16■□□□□ 0.15
TRAPPC11-204ENST00000505676 MED31Q9Y3C7 131 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 CLDN16Q9Y5I7 305 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 UNC119BA6NIH7 251 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 PEX12O00623 359 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR2B3O76000 313 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 NADKO95544 446 aaPredicted RBP16■□□□□ 0.15
TRAPPC11-204ENST00000505676 CTSBP07858 339 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 ZNF12P17014 697 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 BCKDHBP21953 392 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 GRK5P34947 590 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 BMXP51813 675 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 ATP12AP54707 1039 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 MLLT11Q13015 90 aaPredicted RBP16■□□□□ 0.15
TRAPPC11-204ENST00000505676 TMED1Q13445 227 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 FGFBP1Q14512 234 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 ZNF267Q14586 743 aaPredicted RBP16■□□□□ 0.15
TRAPPC11-204ENST00000505676 SPHARQ15513 63 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 AMZ1Q400G9 498 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 ARMC4Q5T2S8 1044 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 QSOX2Q6ZRP7 698 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 SLITRK4Q8IW52 837 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 NDNFQ8TB73 568 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 TAPBPLQ9BX59 468 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 PLA2G12AQ9BZM1 189 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 DCSTAMPQ9H295 470 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms