RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 C6orf10Q5SRN2 563 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 AP1ARQ63HQ0 302 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 VASNQ6EMK4 673 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 SLC2A7Q6PXP3 512 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 RPTNQ6XPR3 784 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 C3P1Q6ZMU1 363 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 C16orf62Q7Z3J2 963 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 ZNF527Q8NB42 609 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 OR5M9Q8NGP3 310 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 OR14L1PQ8NHC6 308 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 XAGE5Q8WWM1 108 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 RAB8BQ92930 207 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 ZNF317Q96PQ6 595 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 TIMP4Q99727 224 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 UGT2B28Q9BY64 529 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 NMUR2Q9GZQ4 415 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 PTGES2Q9H7Z7 377 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 POLE3Q9NRF9 147 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 DKKL1Q9UK85 242 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 LRRK2Q5S007 2527 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 HMGN4O00479 90 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 FCMRO60667 390 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 WDR1O75083 606 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 ANP32DO95626 131 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 ACTL6AO96019 429 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 HOXD4P09016 255 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 HOXB9P17482 250 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 BMP7P18075 431 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 CAPN3P20807 821 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 GCKP35557 465 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 ANXA11P50995 505 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 MVDP53602 400 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 GFRA1P56159 465 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 ADORA2A-AS1P86434 159 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 FUT5Q11128 374 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 GTDC1Q4AE62 458 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 ZNF585AQ6P3V2 769 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 ABTB1Q969K4 478 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 C1GALT1C1Q96EU7 318 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 PRDM14Q9GZV8 571 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 PAIP1Q9H074 479 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 TPT1P8Q9HAU6 139 aa16.55■□□□□ 0.24
PDLIM7-209ENST00000503346 NUP214P35658 2090 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 A0A096LPI6 279 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 NPIPA5A0A0B4J1W7 369 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 PRAMEF27A3QJZ7 478 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 NPIPA7E9PJI5 369 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 NPIPA8P0DM63 369 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 GABRA1P14867 456 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 CD1EP15812 388 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 ACVR2AP27037 513 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 MSX1P28360 303 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 PTGER4P35408 488 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 ARFIP2P53365 341 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 CD226Q15762 336 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 ZNF141Q15928 474 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 COX20Q5RI15 118 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 LRIF1Q5T3J3 769 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 TMEM211Q6ICI0 200 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 IFNEQ86WN2 208 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 PM20D2Q8IYS1 436 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 GATSQ8NAP1 163 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 PNPT1Q8TCS8 783 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 ITLN2Q8WWU7 325 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 OIT3Q8WWZ8 545 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 ROPN1LQ96C74 230 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 SAP130Q9H0E3 1048 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 LIPT1Q9Y234 373 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 DTNAQ9Y4J8 743 aa16.54■□□□□ 0.24
PDLIM7-209ENST00000503346 ZNF407Q9C0G0 2248 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 A0A1W2PP18 115 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 H3BNH8 94 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 KIAA0513O60268 411 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 HK1P19367 917 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 CHMP24386 653 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 B3GALT5-AS1P59052 145 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 ZNF630Q2M218 657 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 GLYR1Q49A26 553 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 PAGE3Q5JUK9 113 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 DCST1Q5T197 706 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 RTL6Q6ICC9 239 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 TYW3Q6IPR3 259 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 AAGABQ6PD74 315 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 ULK2Q8IYT8 1036 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 MARVELD2Q8N4S9 558 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 ZNF808Q8N4W9 903 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 TSPEARQ8WU66 669 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 WDYHV1Q96HA8 205 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 SFXN2Q96NB2 322 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 TRNT1Q96Q11 434 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 MRGBPQ9NV56 204 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 KLHL14Q9P2G3 628 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 KCNE5Q9UJ90 142 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 MKLN1Q9UL63 735 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 WDR45Q9Y484 360 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 PCDHB14Q9Y5E9 798 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 FAM215AQ9Y5M1 114 aa16.53■□□□□ 0.24
PDLIM7-209ENST00000503346 NCKAP5O14513 1909 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms