RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 FBXL14Q8N1E6 418 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 CDYL2Q8N8U2 506 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 GATSQ8NAP1 163 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 ELOA3Q8NG57 546 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 OR4F6Q8NGB9 312 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 CDC26Q8NHZ8 85 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 MUCL1Q96DR8 90 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 MRRFQ96E11 262 aaKnown RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 RNF145Q96MT1 663 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 NSUN5Q96P11 429 aaKnown RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 DDX18Q9NVP1 670 aaKnown RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 HEATR1Q9H583 2144 aaKnown RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 A0A0J9YW62 118 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 LOC100289279A0A1B0GTE1 492 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 PCDH7O60245 1069 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 PLOD3O60568 738 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 LYZL6O75951 148 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 IL33O95760 270 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 PGRP06401 933 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 C2P06681 752 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 CSF3P09919 207 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 STX2P32856 288 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 MPIP34949 423 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 CARD18P57730 90 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 RAC1P63000 192 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 CSTF3Q12996 717 aaKnown RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 ITGADQ13349 1161 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 SQLEQ14534 574 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 HEPACAMQ14CZ8 416 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 RNPS1Q15287 305 aaKnown RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 UAP1Q16222 522 aaPredicted RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 ZNF239Q16600 458 aaKnown RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 TMEM44Q2T9K0 475 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 MROH9Q5TGP6 573 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 METTL2BQ6P1Q9 378 aaKnown RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 SLC22A25Q6T423 547 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 TMEM107Q6UX40 140 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 CCDC91Q7Z6B0 441 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 EXOC3L1Q86VI1 746 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 LRRC8AQ8IWT6 810 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 TUSC5Q8IXB3 177 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 GTPBP8Q8N3Z3 284 aaPredicted RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 RNF128Q8TEB7 428 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 OSTF1Q92882 214 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 C3orf49Q96BT1 292 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 SH3YL1Q96HL8 342 aaPredicted RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 ADGRG7Q96K78 797 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 USB1Q9BQ65 265 aaKnown RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 PLA2G12AQ9BZM1 189 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 GRIP2Q9C0E4 1043 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 VPS11Q9H270 941 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 DPH5Q9H2P9 285 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 BRF2Q9HAW0 419 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 EML4Q9HC35 981 aaKnown RBP10.35□□□□□ -0.75
CDK9-205ENST00000498339 TIGARQ9NQ88 270 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 SLC35C2Q9NQQ7 365 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 CBLN4Q9NTU7 201 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 KLHL13Q9P2N7 655 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 PCTPQ9UKL6 214 aa10.35□□□□□ -0.75
CDK9-205ENST00000498339 A0A087WZY1 265 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 A0A096LPK6 155 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 ESYT3A0FGR9 886 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 CCDC189A1A4V9 331 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 ADAMDEC1O15204 470 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 TP73O15350 636 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 TCF21O43680 179 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 SMIM24O75264 130 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 KLHL2O95198 593 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 KCNH1O95259 989 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 JUNP05412 331 aaKnown RBP10.34□□□□□ -0.75
CDK9-205ENST00000498339 CTAGE8P0CG41 777 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 TCP1P17987 556 aaKnown RBP10.34□□□□□ -0.75
CDK9-205ENST00000498339 TTKP33981 857 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 NCBP2P52298 156 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDK9-205ENST00000498339 P2RY6Q15077 328 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 GRAMD1BQ3KR37 738 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 GGTA1PQ4G0N0 100 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 FAM219BQ5XKK7 198 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 RPS27LQ71UM5 84 aaKnown RBP10.34□□□□□ -0.75
CDK9-205ENST00000498339 GAS2L3Q86XJ1 694 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 TDRPQ86YL5 185 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 CTAGE4Q8IX94 777 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 MUC15Q8N387 334 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 C10orf105Q8TEF2 133 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 PROX1Q92786 737 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 CPNE4Q96A23 557 aaPredicted RBP10.34□□□□□ -0.75
CDK9-205ENST00000498339 ZBTB8AQ96BR9 441 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 KLHL15Q96M94 604 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 NPAS1Q99742 590 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 EBPLQ9BY08 206 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 C3orf14Q9HBI5 128 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 VPS29Q9UBQ0 182 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 RNF14Q9UBS8 474 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 MCM8Q9UJA3 840 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 NFU1Q9UMS0 254 aa10.34□□□□□ -0.75
CDK9-205ENST00000498339 IGLV3-32A0A0A0MS00 114 aa10.33□□□□□ -0.76
CDK9-205ENST00000498339 A0A1W2PRB8 838 aa10.33□□□□□ -0.76
CDK9-205ENST00000498339 SLC35F4A4IF30 521 aa10.33□□□□□ -0.76
CDK9-205ENST00000498339 EIF3HO15372 352 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDK9-205ENST00000498339 OTCP00480 354 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms