RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 GATA6Q92908 595 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 VPS50Q96JG6 964 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 ARHGDIGQ99819 225 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 KLHDC3Q9BQ90 382 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 UBQLN4Q9NRR5 601 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 STX18Q9P2W9 335 aaKnown RBP22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 ANGPTL2Q9UKU9 493 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 APC2O95996 2303 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 CDHR4A6H8M9 788 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 J3KTA2 159 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 OIP5O43482 229 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 FADS1O60427 444 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 BAG2O95816 211 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 TBXA2RP21731 343 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 YAP1P46937 504 aaKnown RBP22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 AP2B1P63010 937 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 FGFBP1Q14512 234 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 NRF1Q16656 503 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 LIN52Q52LA3 116 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 AMIGO2Q86SJ2 522 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 GATSQ8NAP1 163 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 OR10G3Q8NGC4 313 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 CNOT9Q92600 299 aaKnown RBP22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 ATP13A2Q9NQ11 1180 aa22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 MRTO4Q9UKD2 239 aaKnown RBP22.26■■□□□ 1.15
TNFRSF4-203ENST00000497869 NCOR2Q9Y618 2525 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 SYT5O00445 386 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 PRG2P13727 222 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 CDC20Q12834 499 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 AIMP2Q13155 320 aaKnown RBP22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 LARS2Q15031 903 aaKnown RBP22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 RNF220Q5VTB9 566 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 BICRALQ6AI39 1079 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 ERMP1Q7Z2K6 904 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 PQLC1Q8N2U9 271 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 POGLUT1Q8NBL1 392 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 GRHL3Q8TE85 626 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 RNF138Q8WVD3 245 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 RASSF5Q8WWW0 418 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 GEMIN6Q8WXD5 167 aaKnown RBP22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 THAP4Q8WY91 577 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 PROX1Q92786 737 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 FER1L6-AS2Q96M78 137 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 AGPAT4Q9NRZ5 378 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 VNN3Q9NY84 501 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 YARS2Q9Y2Z4 477 aaKnown RBP22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 DTNAQ9Y4J8 743 aa22.25■■□□□ 1.15
TNFRSF4-203ENST00000497869 SERINC4A6NH21 518 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 B4DXG7 233 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 NAGAP17050 411 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 KRT20P35900 424 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 PSMD4P55036 377 aaKnown RBP22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 ACER2Q5QJU3 275 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 PIWIL3Q7Z3Z3 882 aaKnown RBP22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 SLC5A8Q8N695 610 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 SLC22A8Q8TCC7 542 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 SPACA9Q96E40 222 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 CCNL2Q96S94 520 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 NTN4Q9HB63 628 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 ZNF232Q9UNY5 417 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 NTNG1Q9Y2I2 539 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 HRH3Q9Y5N1 445 aa22.24■■□□□ 1.15
TNFRSF4-203ENST00000497869 FFAR1O14842 300 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 FABP3P05413 133 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 ITGA3P26006 1051 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 ZNF136P52737 540 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 PSPHP78330 225 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 RAPSNQ13702 412 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 NTRK2Q16620 822 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 MARCH3Q86UD3 253 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 C10orf67Q8IYJ2 551 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 SLC15A4Q8N697 577 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 SEMA6AQ9H2E6 1030 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 DNAJB12Q9NXW2 375 aaKnown RBP22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 DKK4Q9UBT3 224 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 MED13Q9UHV7 2174 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 ZNF891A8MT65 544 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 HNRNPRO43390 633 aaKnown RBP22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 NGFRP08138 427 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 GKN3PP0CG01 181 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 LCN1P31025 176 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 HOXD11P31277 338 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 PTGDSP41222 190 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 CRTC2Q53ET0 693 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 IL20RBQ6UXL0 311 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 PHF10Q8WUB8 498 aaKnown RBP22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 NRG4Q8WWG1 115 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 ZNF524Q96C55 264 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 HOXD1Q9GZZ0 328 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 LHPPQ9H008 270 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 ANKRD10Q9NXR5 420 aa22.23■■□□□ 1.15
TNFRSF4-203ENST00000497869 CACNA1AO00555 2505 aa22.22■■□□□ 1.15
TNFRSF4-203ENST00000497869 PRSS23O95084 383 aa22.22■■□□□ 1.15
TNFRSF4-203ENST00000497869 EVI2BP34910 448 aa22.22■■□□□ 1.15
TNFRSF4-203ENST00000497869 SSR4P51571 173 aa22.22■■□□□ 1.15
TNFRSF4-203ENST00000497869 IST1P53990 364 aa22.22■■□□□ 1.15
TNFRSF4-203ENST00000497869 KCNC4Q03721 635 aa22.22■■□□□ 1.15
TNFRSF4-203ENST00000497869 PPP1R8Q12972 351 aaKnown RBP22.22■■□□□ 1.15
TNFRSF4-203ENST00000497869 ATP6AP1Q15904 470 aa22.22■■□□□ 1.15
TNFRSF4-203ENST00000497869 JMJD6Q6NYC1 403 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms