RNA–Protein interactions for RNA: ENST00000497762.1

ATP13A1-215, Transcript of ATPase 13A1, human

TSL 2

Gene ATP13A1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-215	ENST00000497762	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.1	□□□□□ -0.63
ATP13A1-215	ENST00000497762		H3BML4	177 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	SCAMP2	O15127	329 aa	Known RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	SEC14L5	O43304	696 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	TBX19	O60806	448 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	KCNH1	O95259	989 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	FGF4	P08620	206 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	PRPS2	P11908	318 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	CHM	P24386	653 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	DNAJA1	P31689	397 aa	Known RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	OPRM1	P35372	400 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	HPCAL1	P37235	193 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	MAP3K8	P41279	467 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	RNF144A	P50876	292 aa	Predicted RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	CLDN15	P56746	228 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	ZSCAN26	Q16670	478 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	DUSP5	Q16690	384 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	CCNJ	Q5T5M9	372 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	MFSD12	Q6NUT3	480 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	KRTCAP2	Q8N6L1	136 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	ANKS4B	Q8N8V4	417 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	SLC16A11	Q8NCK7	471 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	ZFP28	Q8NHY6	868 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	DUSP19	Q8WTR2	217 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	SMPDL3B	Q92485	455 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	JADE3	Q92613	823 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	C1GALT1C1	Q96EU7	318 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	THOC1	Q96FV9	657 aa	Known RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	KLHDC3	Q9BQ90	382 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	SIKE1	Q9BRV8	207 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	POLDIP3	Q9BY77	421 aa	Known RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	TBL1XR1	Q9BZK7	514 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	EML4	Q9HC35	981 aa	Known RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	SLC24A3	Q9HC58	644 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	GALNT8	Q9NY28	637 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	JKAMP	Q9P055	326 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	MARCO	Q9UEW3	520 aa	Predicted RBP	11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	ZDHHC2	Q9UIJ5	367 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	ARL2BP	Q9Y2Y0	163 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	TMED5	Q9Y3A6	229 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	RAP2C	Q9Y3L5	183 aa		11.09	□□□□□ -0.63
ATP13A1-215	ENST00000497762	VPS13C	Q709C8	3753 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	OR2M5	A3KFT3	312 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ERICH4	A6NGS2	130 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762		A6NNC1	897 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	HCRTR2	O43614	444 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	KCNK2	O95069	426 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	NKX2-2	O95096	273 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	OXSR1	O95747	527 aa	Predicted RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ANGPTL1	O95841	491 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	LAMP1	P11279	417 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	CPOX	P36551	454 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	CPA2	P48052	419 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ART1	P52961	327 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	SUCLG1	P53597	346 aa	Known RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	CLDN20	P56880	219 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ZNF781	Q8N8C0	355 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	CDRT4	Q8N9R6	151 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	RFWD2	Q8NHY2	731 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	PIWIL2	Q8TC59	973 aa	Known RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	FIG4	Q92562	907 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	HOXB13	Q92826	284 aa	Predicted RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	WNT2B	Q93097	391 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	FAM120B	Q96EK7	910 aa	Known RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	LRRC46	Q96FV0	321 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ZNF845	Q96IR2	970 aa	Predicted RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	PPP1R36	Q96LQ0	422 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	PPP3R2	Q96LZ3	170 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	NPAS1	Q99742	590 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	TM9SF2	Q99805	663 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	SFXN3	Q9BWM7	321 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	RBM24	Q9BX46	236 aa	Known RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	RASSF1	Q9NS23	344 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	MRTO4	Q9UKD2	239 aa	Known RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	VDAC3	Q9Y277	283 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ZNF337	Q9Y3M9	751 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	MTOR	P42345	2549 aa		11.08	□□□□□ -0.64
ATP13A1-215	ENST00000497762	PRRC2A	P48634	2157 aa	Known RBP	11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762		A0A1W2PNV4	684 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	TUBAL3	A6NHL2	446 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	SLC22A20	A6NK97	555 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	EBAG9	O00559	213 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	EMC8	O43402	210 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	TNFSF13	O75888	250 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	RCBTB2	O95199	551 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	IL18BP	O95998	194 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	IFI6	P09912	130 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	ASMT	P46597	345 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	PSMD4	P55036	377 aa	Known RBP	11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	SIRPA	P78324	504 aa		11.07	□□□□□ -0.64
ATP13A1-215	ENST00000497762	PRR5	P85299	388 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms