RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 GABRA5P31644 462 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 ATP6V1E1P36543 226 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 SLC1A3P43003 542 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 BLKP51451 505 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 HHEXQ03014 270 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 CCINQ13939 588 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 OR1Q1Q15612 314 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 MAPK14Q16539 360 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 KIAA0895LQ68EN5 471 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 RPL13AP3Q6NVV1 102 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 CDK20Q8IZL9 346 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 PSD4Q8NDX1 1056 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 OR5T3Q8NGG3 340 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 BRIX1Q8TDN6 353 aaKnown RBP10.3□□□□□ -0.76
CMSS1-208ENST00000496116 TMEM239Q8WW34 195 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 TMEM203Q969S6 136 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 C1GALT1C1Q96EU7 318 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 WDFY2Q96P53 400 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 BARHL1Q9BZE3 327 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 TCEAL2Q9H3H9 227 aaPredicted RBP10.3□□□□□ -0.76
CMSS1-208ENST00000496116 TPK1Q9H3S4 243 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 C14orf105Q9NVL8 296 aa10.3□□□□□ -0.76
CMSS1-208ENST00000496116 CENPVL1A0A0U1RR11 272 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 CDC42EP2O14613 210 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 AKAP8O43823 692 aaKnown RBP10.29□□□□□ -0.76
CMSS1-208ENST00000496116 BRINP1O60477 761 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 LIMS3P0CW19 117 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 LIMS4P0CW20 117 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 THEGLP0DJG4 465 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 GLULP15104 373 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 PAICSP22234 425 aaKnown RBP10.29□□□□□ -0.76
CMSS1-208ENST00000496116 LTBRP36941 435 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 SLC9A3P48764 834 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 SKP1P63208 163 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 EIF2B5Q13144 721 aaKnown RBP10.29□□□□□ -0.76
CMSS1-208ENST00000496116 COL9A2Q14055 689 aaPredicted RBP10.29□□□□□ -0.76
CMSS1-208ENST00000496116 CRTC2Q53ET0 693 aaPredicted RBP10.29□□□□□ -0.76
CMSS1-208ENST00000496116 C22orf42Q6IC83 251 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 TMPRSS11AQ6ZMR5 421 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 GID4Q8IVV7 300 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 SLC44A3Q8N4M1 653 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 KLHL36Q8N4N3 616 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 TMEM52Q8NDY8 209 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 FANK1Q8TC84 345 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 TM9SF4Q92544 642 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 AP3S1Q92572 193 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 CTHRC1Q96CG8 243 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 SAMD8Q96LT4 415 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 PRSS27Q9BQR3 290 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 MED18Q9BUE0 208 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 OR52D1Q9H346 318 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 SEMA6CQ9H3T2 930 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 EXOGQ9Y2C4 368 aaKnown RBP10.29□□□□□ -0.76
CMSS1-208ENST00000496116 CMAHPQ9Y471 501 aa10.29□□□□□ -0.76
CMSS1-208ENST00000496116 SLC35F4A4IF30 521 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 C10orf142B7Z368 130 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 SGK494L7N484 410 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 PEX12O00623 359 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 PLD2O14939 933 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 OR10H2O60403 315 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 IGLV3-19P01714 112 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 GKN3PP0CG01 181 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 SLC35E2P0CK97 266 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 HTR2AP28223 471 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 GABRA3P34903 492 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 EIF2B2P49770 351 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 PSPHP78330 225 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 MXD1Q05195 221 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ZNF155Q12901 538 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 CBX3Q13185 183 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 EXOSC7Q15024 291 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ZNHIT3Q15649 155 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ZNF542PQ5EBM4 170 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 FIGNL1Q6PIW4 674 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 HSDL2Q6YN16 418 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 QSOX2Q6ZRP7 698 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 SHFQ7M4L6 423 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 LHFPL3Q86UP9 236 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 VWA5B2Q8N398 1253 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 DOK4Q8TEW6 326 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 TMCO6Q96DC7 493 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 TOE1Q96GM8 510 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 FAM210AQ96ND0 272 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 COQ7Q99807 217 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 DPH1Q9BZG8 443 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 UBQLN3Q9H347 655 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 FN3KQ9H479 309 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 TMEM27Q9HBJ8 222 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ERVK13-1Q9NX77 482 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 TOR4AQ9NXH8 423 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 SIDT1Q9NXL6 827 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 IL20RAQ9UHF4 553 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 CYP8B1Q9UNU6 501 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 TMEM5Q9Y2B1 443 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 CAB39Q9Y376 341 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 NKX2-2O95096 273 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 RCBTB2O95199 551 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 IGHA1P01876 353 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 CELA2BP08218 269 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 CT62P0C5K7 136 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms