RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 FNDC5Q8NAU1 212 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 FBXO30Q8TB52 745 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 FIG4Q92562 907 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 JADE3Q92613 823 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 TUBGCP3Q96CW5 907 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 COQ8BQ96D53 544 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 STARD4Q96DR4 205 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 FAM120BQ96EK7 910 aaKnown RBP11.49□□□□□ -0.57
PTPRF-214ENST00000496043 CHMP6Q96FZ7 201 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 PGM2Q96G03 612 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 STACQ99469 402 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 FOXC2Q99958 501 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 BTBD2Q9BX70 525 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 PINK1Q9BXM7 581 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 LIME1Q9H400 295 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 PIGUQ9H490 435 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 DUSP22Q9NRW4 184 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 ZCCHC3Q9NUD5 404 aaKnown RBP11.49□□□□□ -0.57
PTPRF-214ENST00000496043 GIN1Q9NXP7 522 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 GALNT8Q9NY28 637 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 ZNF175Q9Y473 711 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 SNX8Q9Y5X2 465 aa11.49□□□□□ -0.57
PTPRF-214ENST00000496043 KIAA1549Q9HCM3 1950 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 SCDO00767 359 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 RGS16O15492 202 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-214ENST00000496043 SKAP2O75563 359 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-214ENST00000496043 SMNDC1O75940 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
PTPRF-214ENST00000496043 HMGN2P05204 90 aaKnown RBP11.48□□□□□ -0.57
PTPRF-214ENST00000496043 PRPS1L1P21108 318 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 ARRB2P32121 409 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 ETV4P43268 484 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 KIR2DL2P43627 348 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-214ENST00000496043 PCYT1AP49585 367 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 CLDN20P56880 219 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 EMX2Q04743 252 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 FGFBP1Q14512 234 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 TMEM44Q2T9K0 475 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 KRT71Q3SY84 523 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 SPDYE7PQ495Y7 208 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 EXOSC6Q5RKV6 272 aaKnown RBP11.48□□□□□ -0.57
PTPRF-214ENST00000496043 BTLAQ7Z6A9 289 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 MREGQ8N565 214 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 OR56A1Q8NGH5 318 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 ACTRT2Q8TDY3 377 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 ADAMTS15Q8TE58 950 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 SMPDL3BQ92485 455 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 SLC39A3Q9BRY0 314 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 C1orf50Q9BV19 199 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 ACTRT3Q9BYD9 372 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 PARD6BQ9BYG5 372 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 PRRG4Q9BZD6 226 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 HOXD1Q9GZZ0 328 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 SIRT3Q9NTG7 399 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-214ENST00000496043 FBXO34Q9NWN3 711 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 FAF1Q9UNN5 650 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-214ENST00000496043 VDAC3Q9Y277 283 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 MPDZO75970 2070 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 DOCK7Q96N67 2140 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 CSMD2Q7Z408 3487 aa11.48□□□□□ -0.57
PTPRF-214ENST00000496043 A0A1W2PQD3 144 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 WDR91A4D1P6 747 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 SH3D21A4FU49 640 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 SHISA8B8ZZ34 492 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 BIRC5O15392 142 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 CFLARO15519 480 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 C6orf47O95873 294 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 KRT16P08779 473 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 ZNF17P17021 662 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 ATP6V1C1P21283 382 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 ZNF41P51814 821 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 FAM27E3Q08E93 113 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 LASP1Q14847 261 aaKnown RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 PTGR1Q14914 329 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 PON3Q15166 354 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 SMU1Q2TAY7 513 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 CCNJQ5T5M9 372 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 CDC73Q6P1J9 531 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 CAMKMTQ7Z624 323 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 ZAR1Q86SH2 424 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 WDR75Q8IWA0 830 aaKnown RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 KRTCAP2Q8N6L1 136 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 METTL25Q8N6Q8 603 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 GATSQ8NAP1 163 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 CHDHQ8NE62 594 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 B4GALNT2Q8NHY0 566 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 PSMA8Q8TAA3 256 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 FNDC9Q8TBE3 224 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 ZBTB8AQ96BR9 441 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 MOAP1Q96BY2 351 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 OTUB1Q96FW1 271 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 ZNF845Q96IR2 970 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 ZIM3Q96PE6 472 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 BHLHE41Q9C0J9 482 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 CXXC4Q9H2H0 198 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 RNF122Q9H9V4 155 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 PAQR5Q9NXK6 330 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 ELOVL5Q9NYP7 299 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.47□□□□□ -0.571e-10■■□□□ 13.4
PTPRF-214ENST00000496043 PLEKHA6Q9Y2H5 1048 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms