RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 GABRG1Q8N1C3 465 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 TMCO6Q96DC7 493 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 MUCL1Q96DR8 90 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 F2RL3Q96RI0 385 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 TBCDQ9BTW9 1192 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 SUCNR1Q9BXA5 334 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 NXF5Q9H1B4 397 aaKnown RBP8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 OR10A5Q9H207 317 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 UNKLQ9H9P5 680 aaKnown RBP8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 SYBUQ9NX95 663 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 PHF11Q9UIL8 331 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 MGAT4BQ9UQ53 548 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 PRR14LQ5THK1 2151 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 EPPK1P58107 5090 aaKnown RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 PGPEP1LA6NFU8 196 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 ERICH4A6NGS2 130 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 RTCAO00442 366 aaKnown RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 UGT2B11O75310 529 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 AIFM1O95831 613 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 TBX6O95947 436 aaPredicted RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 ENO2P09104 434 aaPredicted RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 TPM1P09493 284 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 MTHFD2P13995 350 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 H2AFXP16104 143 aaPredicted RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 HK1P19367 917 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 MGAT1P26572 445 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 AGTR1P30556 359 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 STIP1P31948 543 aaKnown RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 BUD31P41223 144 aaPredicted RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 SLC6A8P48029 635 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 ZNF75DP51815 510 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 HADHBP55084 474 aaKnown RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 HNRNPH2P55795 449 aaKnown RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 RWDD2BP57060 319 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 TNFRSF17Q02223 184 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 PMS2P11Q13670 270 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 AADACL2Q6P093 401 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 TMEM108Q6UXF1 575 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 RBM43Q6ZSC3 357 aaKnown RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 DENND6AQ8IWF6 608 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 TEX29Q8N6K0 151 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 SLC35B2Q8TB61 432 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 CCDC42Q96M95 316 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 C16orf45Q96MC5 204 aaPredicted RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 C7orf26Q96N11 449 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 PITHD1Q9GZP4 211 aaPredicted RBP8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 TAS2R13Q9NYV9 303 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 IKZF3Q9UKT9 509 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 ZNF337Q9Y3M9 751 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 GRIP1Q9Y3R0 1128 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 EXPH5Q8NEV8 1989 aa8.47□□□□□ -1.05
SMARCAL1-213ENST00000496037 NPIPA5A0A0B4J1W7 369 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 TRIM64CA6NLI5 447 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 NPIPA7E9PJI5 369 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 SHOXO15266 292 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 PRKRAO75569 313 aaKnown RBP8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 WDR47O94967 919 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 SCELO95171 688 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 SYNGR4O95473 234 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 GPR75O95800 540 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 ADAP00813 363 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 NPIPA8P0DM63 369 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 GPX3P22352 226 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 IL2RGP31785 369 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 ATP6V1E1P36543 226 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 BPIFB3P59826 476 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 SLAMF1Q13291 335 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 ITGADQ13349 1161 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 GANABQ14697 944 aaKnown RBP8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 PFKFB4Q16877 469 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 PLBD1Q6P4A8 553 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 PAQR3Q6TCH7 311 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 TFAP2EQ6VUC0 442 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 Q6ZSR9 355 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 BHLHA15Q7RTS1 189 aaPredicted RBP8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 GPR180Q86V85 440 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 ANKRD13BQ86YJ7 626 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 ZNF615Q8N8J6 731 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 ATG16L2Q8NAA4 619 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 SPC24Q8NBT2 197 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 OR8H1Q8NGG4 311 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 IPCEF1Q8WWN9 437 aaPredicted RBP8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 MTBPQ96DY7 904 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 SORCS2Q96PQ0 1159 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 SNX18Q96RF0 628 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 NDNQ99608 321 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 CDC42EP4Q9H3Q1 356 aaKnown RBP8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 NT5DC2Q9H857 520 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 CNTD2Q9H8S5 307 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 CXorf21Q9HAI6 301 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 DDX28Q9NUL7 540 aaKnown RBP8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 PAQR5Q9NXK6 330 aaPredicted RBP8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 PPP4R1LQ9P1A2 415 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 STOML1Q9UBI4 398 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 CFL2Q9Y281 166 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 AP4B1Q9Y6B7 739 aa8.46□□□□□ -1.06
SMARCAL1-213ENST00000496037 OR2M5A3KFT3 312 aa8.45□□□□□ -1.06
SMARCAL1-213ENST00000496037 CCT8L1PA6NM43 557 aa8.45□□□□□ -1.06
SMARCAL1-213ENST00000496037 B4DSR2 109 aa8.45□□□□□ -1.06
SMARCAL1-213ENST00000496037 ACOX3O15254 700 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms