RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 MTTPP55157 894 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 IL1RL1Q01638 556 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 CKAP4Q07065 602 aaKnown RBP2.42□□□□□ -2.02
VPS50-219ENST00000495039 ADPRMQ3LIE5 342 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 PARP10Q53GL7 1025 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 UFSP1Q6NVU6 142 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 MOB1BQ7L9L4 216 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 HSD11B1LQ7Z5J1 315 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 SYVN1Q86TM6 617 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 MISPQ8IVT2 679 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 EFCAB13Q8IY85 973 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 ENTHD1Q8IYW4 607 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 C18orf25Q96B23 403 aaPredicted RBP2.42□□□□□ -2.02
VPS50-219ENST00000495039 UPRTQ96BW1 309 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 SLC25A38Q96DW6 304 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 FAM122AQ96E09 287 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 TBCDQ9BTW9 1192 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 C19orf24Q9BVV8 132 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 SLC25A51Q9H1U9 297 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 ACTR8Q9H981 624 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 GPN2Q9H9Y4 310 aaPredicted RBP2.42□□□□□ -2.02
VPS50-219ENST00000495039 PNO1Q9NRX1 252 aaKnown RBP2.42□□□□□ -2.02
VPS50-219ENST00000495039 ATXN10Q9UBB4 475 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 FOXJ3Q9UPW0 622 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 MGAT4BQ9UQ53 548 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 CA5BQ9Y2D0 317 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 L3MBTL1Q9Y468 752 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 AP4B1Q9Y6B7 739 aa2.42□□□□□ -2.02
VPS50-219ENST00000495039 PARD3Q8TEW0 1356 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 SAGE2PA6NJ88 616 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 ZSCAN5BA6NJL1 495 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 ZFP92A6NM28 416 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 WWP2O00308 870 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 VPS26AO75436 327 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 FOXH1O75593 365 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 STAM2O75886 525 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 HSPB1P04792 205 aaKnown RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 THRBP10828 461 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 BCKDHAP12694 445 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 CD1EP15812 388 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 PSMB1P20618 241 aaKnown RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 PAICSP22234 425 aaKnown RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 DPP4P27487 766 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 CCND2P30279 289 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 RPL4P36578 427 aaKnown RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 OR3A4PP47883 348 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 TRPC1P48995 793 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 SLC26A2P50443 739 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 NOVA1P51513 510 aaKnown RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 NAPAP54920 295 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 DIO3P55073 304 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 STX17P56962 302 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 RND3P61587 244 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 RPS8P62241 208 aaKnown RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 HSF2Q03933 536 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 BCL2L1Q07817 233 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 ZNF154Q13106 437 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 DPYSQ14117 519 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 PRR4Q16378 134 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 SBK1Q52WX2 424 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 METTL11BQ5VVY1 283 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 OR8G2PQ6IF36 304 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 ISLR2Q6UXK2 745 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 TFAP2EQ6VUC0 442 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 TMEM184AQ6ZMB5 413 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 CYS1Q717R9 158 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 CBWD2Q8IUF1 395 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 ZSCAN4Q8NAM6 433 aaPredicted RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 IL1F10Q8WWZ1 152 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 TMEM80Q96HE8 168 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 DHTKD1Q96HY7 919 aaPredicted RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 HPDLQ96IR7 371 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 FEM1AQ9BSK4 669 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 POLR3FQ9H1D9 316 aaPredicted RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 ZNF702PQ9H963 129 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 COG4Q9H9E3 785 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 UTP6Q9NYH9 597 aaKnown RBP2.41□□□□□ -2.02
VPS50-219ENST00000495039 RDH8Q9NYR8 311 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 CRLS1Q9UJA2 301 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 ABCG2Q9UNQ0 655 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 CHMP2BQ9UQN3 213 aa2.41□□□□□ -2.02
VPS50-219ENST00000495039 RAI1Q7Z5J4 1906 aaPredicted RBP2.4□□□□□ -2.02
VPS50-219ENST00000495039 LRRC30A6NM36 301 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 DHRS7CA6NNS2 312 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 LATO43561 262 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 ZNF254O75437 659 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 STX11O75558 287 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 CABYRO75952 493 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 CD55P08174 381 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 ANXA3P12429 323 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 XRCC1P18887 633 aaPredicted RBP2.4□□□□□ -2.03
VPS50-219ENST00000495039 CYLC1P35663 651 aaPredicted RBP2.4□□□□□ -2.03
VPS50-219ENST00000495039 PTGFRP43088 359 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 VLDLRP98155 873 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 TRIP10Q15642 601 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 INAQ16352 499 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 OR5M10Q6IEU7 315 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 UNC5DQ6UXZ4 953 aa2.4□□□□□ -2.03
VPS50-219ENST00000495039 CENPUQ71F23 418 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms