RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PRF1P14222 555 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 NME5P56597 212 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 UFM1P61960 85 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 SLC34A1Q06495 639 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 TFF3Q07654 80 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 VPS26BQ4G0F5 336 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 CYP27C1Q4G0S4 372 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 ZNF385BQ569K4 471 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 SAMD4BQ5PRF9 694 aaKnown RBP12.02□□□□□ -0.49
ERCC3-209ENST00000494464 RIPPLY2Q5TAB7 128 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 PM20D2Q8IYS1 436 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 DPP10Q8N608 796 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 FAM83FQ8NEG4 500 aaPredicted RBP12.02□□□□□ -0.49
ERCC3-209ENST00000494464 ZFP28Q8NHY6 868 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 GFM2Q969S9 779 aaKnown RBP12.02□□□□□ -0.49
ERCC3-209ENST00000494464 PPCDCQ96CD2 204 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 ASB9Q96DX5 294 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 DTNBP1Q96EV8 351 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 ZBED6CLQ96FA7 236 aaPredicted RBP12.02□□□□□ -0.49
ERCC3-209ENST00000494464 TEX37Q96LM6 180 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 ANKRD27Q96NW4 1050 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 ADOQ96SZ5 270 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 LMF2Q9BU23 707 aaKnown RBP12.02□□□□□ -0.49
ERCC3-209ENST00000494464 TRIM8Q9BZR9 551 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 OR2B2Q9GZK3 357 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 ACSS1Q9NUB1 689 aaPredicted RBP12.02□□□□□ -0.49
ERCC3-209ENST00000494464 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 OR10H1Q9Y4A9 318 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 NOTCH2Q04721 2471 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 FBN2P35556 2912 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 A0A0G2JNJ9 132 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 H0Y3Z8 333 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 BCKDHAP12694 445 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 DDX5P17844 614 aaKnown RBP12.01□□□□□ -0.49
ERCC3-209ENST00000494464 IGFBP2P18065 325 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 IL12AP29459 219 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 KIR3DL1P43629 444 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 TRAP1Q12931 704 aaKnown RBP12.01□□□□□ -0.49
ERCC3-209ENST00000494464 HSPB3Q12988 150 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 ZNHIT3Q15649 155 aaPredicted RBP12.01□□□□□ -0.49
ERCC3-209ENST00000494464 VASNQ6EMK4 673 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 ANKRD26P1Q6NSI1 321 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 R3HCC1LQ7Z5L2 792 aaKnown RBP12.01□□□□□ -0.49
ERCC3-209ENST00000494464 ARPINQ7Z6K5 226 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 PLCZ1Q86YW0 608 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 CCDC71Q8IV32 467 aaPredicted RBP12.01□□□□□ -0.49
ERCC3-209ENST00000494464 WDSUB1Q8N9V3 476 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 OR4N2Q8NGD1 307 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 HOXB13Q92826 284 aaPredicted RBP12.01□□□□□ -0.49
ERCC3-209ENST00000494464 EFHD2Q96C19 240 aaPredicted RBP12.01□□□□□ -0.49
ERCC3-209ENST00000494464 ZBTB18Q99592 522 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 TIMP4Q99727 224 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 UGT2B28Q9BY64 529 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 S100A14Q9HCY8 104 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 Q9N2J8 555 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 ADA2Q9NZK5 511 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 NTMQ9P121 344 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 Q9UFV3 132 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 CD300AQ9UGN4 299 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 ABCG2Q9UNQ0 655 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 MAPRE3Q9UPY8 281 aa12.01□□□□□ -0.49
ERCC3-209ENST00000494464 FAM90A27PA6NNH2 459 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 AHRRA9YTQ3 701 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 ACOT8O14734 319 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 SCAMP2O15127 329 aaKnown RBP12□□□□□ -0.49
ERCC3-209ENST00000494464 AKAP10O43572 662 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 CBR3O75828 277 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 TOXO94900 526 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 ACTL6AO96019 429 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 CYP4B1P13584 511 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 MSX1P28360 303 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 EVI2BP34910 448 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 GPC1P35052 558 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 HPCAL1P37235 193 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 RPL3P39023 403 aaKnown RBP12□□□□□ -0.49
ERCC3-209ENST00000494464 ADH7P40394 386 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 SLC7A2P52569 658 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 GAS1P54826 345 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 NFYCQ13952 458 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 FLOT2Q14254 428 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 MLC1Q15049 377 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 TOMM20Q15388 145 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 SF3B4Q15427 424 aaKnown RBP eCLIP12□□□□□ -0.492e-10■■■■■ 28
ERCC3-209ENST00000494464 DECR1Q16698 335 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 ACSF3Q4G176 576 aaPredicted RBP12□□□□□ -0.49
ERCC3-209ENST00000494464 TIGD2Q4W5G0 525 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 EIPR1Q53HC9 387 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 WIPI1Q5MNZ9 446 aaPredicted RBP12□□□□□ -0.49
ERCC3-209ENST00000494464 ZFP1Q6P2D0 407 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 ZNF551Q7Z340 670 aaPredicted RBP12□□□□□ -0.49
ERCC3-209ENST00000494464 CLHC1Q8NHS4 586 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 CIDECQ96AQ7 238 aaPredicted RBP12□□□□□ -0.49
ERCC3-209ENST00000494464 LRRC58Q96CX6 371 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 KCNJ16Q9NPI9 418 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 SERHLQ9NQF3 203 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 NPDC1Q9NQX5 325 aaPredicted RBP12□□□□□ -0.49
ERCC3-209ENST00000494464 SH3BP4Q9P0V3 963 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 ATP6V1HQ9UI12 483 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 MRTO4Q9UKD2 239 aaKnown RBP12□□□□□ -0.49
ERCC3-209ENST00000494464 CBLCQ9ULV8 474 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms