RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ITIH4Q14624 930 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 GANABQ14697 944 aaKnown RBP1.99□□□□□ -2.09
PTPN12-212ENST00000494248 TMEM132DQ14C87 1099 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 HSPB2Q16082 182 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 SGCAQ16586 387 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PTGISQ16647 500 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 ZSWIM7Q19AV6 140 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 ODF4Q2M2E3 257 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 XKR6Q5GH73 641 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 COQ5Q5HYK3 327 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 C6orf183Q5T699 404 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 IRAK1BP1Q5VVH5 260 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 TIGD3Q6B0B8 471 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 HIST2H2AA3Q6FI13 130 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 SIGIRRQ6IA17 410 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 FAM166AQ6J272 317 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 KCNIP4Q6PIL6 250 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PLXDC2Q6UX71 529 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 UTS2BQ765I0 119 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 G2E3Q7L622 706 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 GPR141Q7Z602 305 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 CCDC190Q86UF4 302 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PLD3Q8IV08 490 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 MAP7D3Q8IWC1 876 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 MFSD6LQ8IWD5 586 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 IQCKQ8N0W5 287 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 SPAG16Q8N0X2 631 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 GPC2Q8N158 579 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 RYBPQ8N488 228 aaPredicted RBP1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PARP16Q8N5Y8 322 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 BEST2Q8NFU1 509 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 DMBX1Q8NFW5 382 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 OR10H4Q8NGA5 316 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 OR10Q1Q8NGQ4 319 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 OR1J2Q8NGS2 313 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 VANGL1Q8TAA9 524 aaPredicted RBP1.99□□□□□ -2.09
PTPN12-212ENST00000494248 HM13Q8TCT9 377 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PPP4R1Q8TF05 950 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 UBTD2Q8WUN7 234 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 GTF2H4Q92759 462 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PROX1Q92786 737 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 SNAPC3Q92966 411 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 LHX4Q969G2 390 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 GLYATL1Q969I3 302 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 RAD51AP1Q96B01 352 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 OTULINQ96BN8 352 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 RNF183Q96D59 192 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 RAB39BQ96DA2 213 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 DUS3LQ96G46 650 aaKnown RBP1.99□□□□□ -2.09
PTPN12-212ENST00000494248 HPDLQ96IR7 371 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 AKR1E2Q96JD6 320 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PRMT6Q96LA8 375 aaPredicted RBP1.99□□□□□ -2.09
PTPN12-212ENST00000494248 SGK494Q96LW2 274 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 C3orf30Q96M34 536 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 VSTM2LQ96N03 204 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF570Q96NI8 536 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 RIT2Q99578 217 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 CTRCQ99895 268 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 SLC30A2Q9BRI3 323 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 TTYH2Q9BSA4 534 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 MED10Q9BTT4 135 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PARD6BQ9BYG5 372 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 GSDMCQ9BYG8 508 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 NPFFR1Q9GZQ6 430 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 ILKAPQ9H0C8 392 aaPredicted RBP1.99□□□□□ -2.09
PTPN12-212ENST00000494248 GANQ9H2C0 597 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 NARFLQ9H6Q4 476 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 C12orf10Q9HB07 376 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 SLC40A1Q9NP59 571 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 DYRK4Q9NR20 520 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PXMP2Q9NR77 195 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF701Q9NV72 531 aaPredicted RBP1.99□□□□□ -2.09
PTPN12-212ENST00000494248 LYARQ9NX58 379 aaKnown RBP1.99□□□□□ -2.09
PTPN12-212ENST00000494248 NLGN3Q9NZ94 848 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 SLC17A7Q9P2U7 560 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 OR14J1Q9UGF5 321 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 CLEC2DQ9UHP7 191 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PITPNC1Q9UKF7 332 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 ABCG2Q9UNQ0 655 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 LRRC42Q9Y546 428 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 KLK4Q9Y5K2 254 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 USP16Q9Y5T5 823 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 A3GALT2U3KPV4 340 aa1.99□□□□□ -2.09
PTPN12-212ENST00000494248 PNPLA6Q8IY17 1366 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CDHR2Q9BYE9 1310 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 FANCIQ9NVI1 1328 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 MAPK8IP3Q9UPT6 1336 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TRAV24A0A0B4J272 114 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 PPIAL4CA0A0B4J2A2 164 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 IGKV6D-41A0A0C4DH26 115 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 A0A0U1RQF3 1178 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 A0A1W2PPE3 182 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 A0A1W2PPK0 400 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 BCLAF3A2AJT9 711 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TMEM213A2RRL7 107 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TYW5A2RUC4 315 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 MTMR11A4FU01 709 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF840PA6NDX5 716 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SMCO2A6NFE2 343 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TMEM202A6NGA9 273 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms