RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 REXO4Q9GZR2 422 aaKnown RBP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SLC22A4Q9H015 551 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.59□□□□□ -1.19
HDAC6-234ENST00000493923 DCSTAMPQ9H295 470 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 NMRAL1Q9HBL8 299 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 TMEM45AQ9NWC5 275 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 DCAF16Q9NXF7 216 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 TAS2R13Q9NYV9 303 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 EHD3Q9NZN3 535 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 TMEM216Q9P0N5 145 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 TMCC3Q9ULS5 477 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 MAPRE3Q9UPY8 281 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 SESN1Q9Y6P5 492 aa7.59□□□□□ -1.19
HDAC6-234ENST00000493923 ADGRG4Q8IZF6 3080 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 CCDC182A6NF36 153 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 EFCAB9A8MZ26 197 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 FAM227AF5H4B4 570 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 G3V2L1 256 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 H0YIG0 161 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 TGFBR3LH3BV60 316 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 UBDO15205 165 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 SLC16A5O15375 505 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 CHST10O43529 356 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 OR1F1O43749 312 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ADAM11O75078 769 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 SNAP29O95721 258 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 TBX6O95947 436 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 C8GP07360 202 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF888P0CJ79 500 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 EDN3P14138 238 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 RAB3AP20336 220 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 SAT1P21673 171 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ACVR2AP27037 513 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ELK4P28324 431 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 UQCRC1P31930 480 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 MSX2P35548 267 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 AVPR1BP47901 424 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 GZMKP49863 264 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 SLC7A2P52569 658 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 TAS2R39P59534 338 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 POU6F2P78424 691 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 BTG2P78543 158 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 REEP5Q00765 189 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 RIN1Q13671 783 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 CDSNQ15517 529 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 BTBD16Q32M84 506 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 DEFB134Q4QY38 66 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 AGKQ53H12 422 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 RUNDC3AQ59EK9 446 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ARMC4Q5T2S8 1044 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ADNP2Q6IQ32 1131 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 H3F3CQ6NXT2 135 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 RPUSD3Q6P087 351 aaKnown RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 LUZP2Q86TE4 346 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF227Q86WZ6 799 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 CEP97Q8IW35 865 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 SPATA6LQ8N4H0 392 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 OR7G3Q8NG95 312 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 VANGL1Q8TAA9 524 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 NDNFQ8TB73 568 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 DEDD2Q8WXF8 326 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 NR4A3Q92570 626 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 SLC38A4Q969I6 547 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 TUBGCP3Q96CW5 907 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 MUS81Q96NY9 551 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 PELOQ9BRX2 385 aaKnown RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 BTBD2Q9BX70 525 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 TSPAN10Q9H1Z9 355 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 NPDC1Q9NQX5 325 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ANKRD10Q9NXR5 420 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 ARL15Q9NXU5 204 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 MAT2BQ9NZL9 334 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 OPTCQ9UBM4 332 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 MAGEL2Q9UJ55 1249 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 PRELID3BQ9Y3B1 194 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 KLF2Q9Y5W3 355 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-234ENST00000493923 SPG11Q96JI7 2443 aa7.58□□□□□ -1.2
HDAC6-234ENST00000493923 CSMD2Q7Z408 3487 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 A0A075B6Q4 140 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 TRAV17A0A0B4J275 112 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 A0A0G2JMP0 313 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 A0A0G2JN53 185 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 ATP6AP2A0A1C7CYW4 349 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 MEIOCA2RUB1 952 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 OR5H15A6NDH6 313 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 EFCAB10A6NFE3 127 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 PRSS44E7EML9 344 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SDHDO14521 159 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 STX16O14662 325 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 ARPC2O15144 300 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 NDUFS4O43181 175 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 GALR3O60755 368 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 B4GALT2O60909 372 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 PRSS23O95084 383 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 WISP3O95389 354 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 NPPAP01160 153 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SERPIND1P05546 499 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 STSP08842 583 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SMIM10L1P0DMW3 83 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SPNP16150 400 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms