RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SLC43A1O75387 559 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 ITGA10O75578 1167 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 CREG1O75629 220 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 BCAS2O75934 225 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-222ENST00000493919 MYF5P13349 255 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 ACRV1P26436 265 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 MAGEA3P43357 314 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 CTSCP53634 463 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 MRPS11P82912 194 aaKnown RBP10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SLC18A2Q05940 514 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 MADCAM1Q13477 382 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 GBX1Q14549 363 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PTGR1Q14914 329 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 CNN3Q15417 329 aaKnown RBP10.86□□□□□ -0.67
BRCA1-222ENST00000493919 GPR19Q15760 415 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 MOGAT2Q3SYC2 334 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 FASTKD1Q53R41 847 aaKnown RBP10.86□□□□□ -0.67
BRCA1-222ENST00000493919 FNBP1LQ5T0N5 605 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PIANPQ8IYJ0 282 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 FAM46DQ8NEK8 389 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 OR4L1Q8NH43 312 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 DCAKDQ8WVC6 231 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 LINC00052Q96N35 136 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SFXN2Q96NB2 322 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 COPS8Q99627 209 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 DUSP23Q9BVJ7 150 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 RNF32Q9H0A6 362 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 DPEP2Q9H4A9 486 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 MID1IP1Q9NPA3 183 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 ADAP2Q9NPF8 381 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 ABCB10Q9NRK6 738 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 TREX1Q9NSU2 369 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 LYARQ9NX58 379 aaKnown RBP10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PTTG3PQ9NZH4 202 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 UBQLN2Q9UHD9 624 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SCP2D1Q9UJQ7 156 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 TCFL5Q9UL49 500 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SPAARA0A1B0GVQ0 90 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 PLSCR5A0PG75 271 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 SLC28A1O00337 649 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 COPEO14579 308 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 TM4SF5O14894 197 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 LYPLA1O75608 230 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-222ENST00000493919 SORBS2O94875 1100 aaKnown RBP10.85□□□□□ -0.67
BRCA1-222ENST00000493919 VAPBO95292 243 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 ONECUT2O95948 504 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 GIMD1P0DJR0 217 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-222ENST00000493919 MYL2P10916 166 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 CSRP1P21291 193 aaKnown RBP10.85□□□□□ -0.67
BRCA1-222ENST00000493919 HLA-DMAP28067 261 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 CXCR4P61073 352 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 SIM1P81133 766 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-222ENST00000493919 ACVR1Q04771 509 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 IL24Q13007 206 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 DUSP8Q13202 625 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 MSS51Q4VC12 460 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 RNASE10Q5GAN6 216 aaKnown RBP10.85□□□□□ -0.67
BRCA1-222ENST00000493919 PRAMEF20Q5VT98 475 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 RDH10Q8IZV5 341 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 RASGEF1AQ8N9B8 481 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 GDPD1Q8N9F7 314 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 BANPQ8N9N5 519 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 MFSD9Q8NBP5 474 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 TMEM104Q8NE00 496 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 NDNFQ8TB73 568 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 GLYATL2Q8WU03 294 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 KIAA1143Q96AT1 154 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-222ENST00000493919 SCARF2Q96GP6 870 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-222ENST00000493919 CLPTM1LQ96KA5 538 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 FAM210BQ96KR6 192 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 UCN2Q96RP3 112 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 INTS14Q96SY0 518 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 BOCQ9BWV1 1114 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 GULP1Q9UBP9 304 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 SLC23A1Q9UHI7 598 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 SPTBN2O15020 2390 aa10.85□□□□□ -0.67
BRCA1-222ENST00000493919 GOLGA4Q13439 2230 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 A0A0U1RQK1 487 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 RNF103-CHMP3A0A140T963 221 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 A0A1W2PPH5 198 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ZNF320A2RRD8 509 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 WASHC1A8K0Z3 465 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 A8MXK9 166 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 POC1B-GALNT4F8VUJ3 575 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 PRMT5O14744 637 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SCAMP2O15127 329 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 KCNK5O95279 499 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 LY86O95711 162 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 FTH1P02794 183 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 CRYGCP07315 174 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 IFNGR1P15260 489 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 HSD11B1P28845 292 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 MSX2P35548 267 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 KCNC1P48547 511 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 CAMLGP49069 296 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SRP9P49458 86 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 XKP51811 444 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ARL4CP56559 192 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 BIKQ13323 160 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms