RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 BCORP1Q8N888 145 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 RHOXF1Q8NHV9 184 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 PTPMT1Q8WUK0 201 aaPredicted RBP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 OIT3Q8WWZ8 545 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SGCDQ92629 289 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 DAZLQ92904 295 aaKnown RBP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SLC35B4Q969S0 331 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 TMIGD2Q96BF3 282 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 DGCR14Q96DF8 476 aaKnown RBP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 CLIP3Q96DZ5 547 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 SENP5Q96HI0 755 aaPredicted RBP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 LOXL4Q96JB6 756 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 NODALQ96S42 347 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 TUBA1CQ9BQE3 449 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF559Q9BR84 538 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 OR8D2Q9GZM6 311 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 TGIF2Q9GZN2 237 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 VN1R1Q9GZP7 353 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 CCDC90BQ9GZT6 254 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 PAK1IP1Q9NWT1 392 aaPredicted RBP8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF226Q9NYT6 803 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 CTSFQ9UBX1 484 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 AASSQ9UDR5 926 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 PCDHGA5Q9Y5G8 931 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 CEPT1Q9Y6K0 416 aa8.46□□□□□ -1.06
SMARCC1-208ENST00000492896 DNAH14Q0VDD8 3507 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 IGLV3-12A0A075B6K2 115 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 FRG2CA6NGY1 282 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PTGES3LE9PB15 166 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 AGRPO00253 132 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 NTN3O00634 580 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 KHNYNO15037 678 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 RGS10O43665 173 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 TIAF1O95411 115 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 LDOC1O95751 146 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 IGKV3-11P04433 115 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 TP53P04637 393 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 HTR1AP08908 422 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 GKN3PP0CG01 181 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PRG2P13727 222 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 GABRB1P18505 474 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 DRD5P21918 477 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 AVPR2P30518 371 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 CSTF2P33240 577 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PPICP45877 212 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 OMPP47874 163 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 RNF144AP50876 292 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 EFNA3P52797 238 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 DCAF7P61962 342 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 OCA2Q04671 838 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PIGFQ07326 219 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 TSPAN31Q12999 210 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 RAB39AQ14964 217 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 OR1Q1Q15612 314 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 NSDHLQ15738 373 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 SMN1Q16637 294 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 NKAIN1Q4KMZ8 207 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 TMEM236Q5W0B7 351 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PWWP2BQ6NUJ5 590 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF613Q6PF04 617 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 CASP12Q6UXS9 341 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 MBOAT2Q6ZWT7 520 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF550Q7Z398 422 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PRICKLE2Q7Z3G6 844 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 BPHLQ86WA6 291 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PPP1R3BQ86XI6 285 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 NKAIN4Q8IVV8 208 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 CMIPQ8IY22 773 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF321PQ8N8H1 164 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF540Q8NDQ6 660 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PLPP5Q8NEB5 264 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 TEX47Q8TBZ9 253 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 STT3BQ8TCJ2 826 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 ZNF721Q8TF20 911 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 CNOT9Q92600 299 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 UBE2FQ969M7 185 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 FAM46AQ96IP4 442 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 LCORQ96JN0 433 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 MYCBPQ99417 103 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 TSC22D3Q99576 134 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 ARRDC1-AS1Q9H2J1 176 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 SMOC1Q9H4F8 434 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 DUSP21Q9H596 190 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 TMEM27Q9HBJ8 222 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 SLC25A19Q9HC21 320 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 SLC22A11Q9NSA0 550 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PLCXD1Q9NUJ7 323 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 DNAJB12Q9NXW2 375 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 ERVK-18Q9QC07 812 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 COPS7AQ9UBW8 275 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 RSL24D1Q9UHA3 163 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 MRTO4Q9UKD2 239 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 MKL2Q9ULH7 1088 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 SLC7A7Q9UM01 511 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 PCDHGB2Q9Y5G2 931 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 HEATR5AQ86XA9 2040 aa8.45□□□□□ -1.06
SMARCC1-208ENST00000492896 SH3D21A4FU49 640 aa8.44□□□□□ -1.06
SMARCC1-208ENST00000492896 SERINC4A6NH21 518 aa8.44□□□□□ -1.06
SMARCC1-208ENST00000492896 OR6C76A6NM76 312 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms