RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 ZNF763Q0D2J5 394 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 STX5Q13190 355 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 PON3Q15166 354 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 CHI3L2Q15782 390 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 GLYR1Q49A26 553 aaPredicted RBP17.89■□□□□ 0.45
NELFE-212ENST00000492539 TTMPQ5BVD1 217 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 SH2D4BQ5SQS7 431 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 HHATQ5VTY9 493 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 KANK2Q63ZY3 851 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 RNF165Q6ZSG1 346 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 YTHDF3Q7Z739 585 aaKnown RBP17.89■□□□□ 0.45
NELFE-212ENST00000492539 GOLGA6L1Q8N7Z2 621 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 ZNF610Q8N9Z0 462 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 OR5M1Q8NGP8 315 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.89■□□□□ 0.45
NELFE-212ENST00000492539 PIGQQ9BRB3 760 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 BDH2Q9BUT1 245 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 PTGES2Q9H7Z7 377 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 NKIRAS1Q9NYS0 192 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 TAS2R7Q9NYW3 318 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 PROCRQ9UNN8 238 aa17.89■□□□□ 0.45
NELFE-212ENST00000492539 ROS1P08922 2347 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 TMEM114B3SHH9 223 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 UPK1AO00322 258 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 SASH3O75995 380 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 IL33O95760 270 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 JUNP05412 331 aaKnown RBP17.88■□□□□ 0.45
NELFE-212ENST00000492539 FGF4P08620 206 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 ARRB2P32121 409 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 KCNJ5P48544 419 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 NCBP2P52298 156 aaKnown RBP eCLIP17.88■□□□□ 0.452e-7■■□□□ 11.8
NELFE-212ENST00000492539 WDR4P57081 412 aaKnown RBP17.88■□□□□ 0.45
NELFE-212ENST00000492539 BTKQ06187 659 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 C2orf80Q0P641 193 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 DECR1Q16698 335 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 CLEC6AQ6EIG7 209 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 FAM71E1Q6IPT2 247 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 TMEM107Q6UX40 140 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 TRIM46Q7Z4K8 759 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 PRIMA1Q86XR5 153 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 OR2L13Q8N349 312 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 NUDT8Q8WV74 236 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 IGFBPL1Q8WX77 278 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 LMF2Q9BU23 707 aaKnown RBP17.88■□□□□ 0.45
NELFE-212ENST00000492539 Q9N2J8 555 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 AP4B1Q9Y6B7 739 aa17.88■□□□□ 0.45
NELFE-212ENST00000492539 ANK3Q12955 4377 aaKnown RBP17.88■□□□□ 0.45
NELFE-212ENST00000492539 IGLV3-32A0A0A0MS00 114 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 RPS3AP61247 264 aaKnown RBP17.87■□□□□ 0.45
NELFE-212ENST00000492539 TMEM44Q2T9K0 475 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 FAM214BQ7L5A3 538 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 MARCH3Q86UD3 253 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 DUSP19Q8WTR2 217 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 PERPQ96FX8 193 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 ZC3HAV1LQ96H79 300 aaKnown RBP17.87■□□□□ 0.45
NELFE-212ENST00000492539 PAIP2Q9BPZ3 127 aaKnown RBP17.87■□□□□ 0.45
NELFE-212ENST00000492539 GSX2Q9BZM3 304 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 GLIPR2Q9H4G4 154 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 MRTO4Q9UKD2 239 aaKnown RBP17.87■□□□□ 0.45
NELFE-212ENST00000492539 TRAF6Q9Y4K3 522 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 CSPG4Q6UVK1 2322 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 HIVEP2P31629 2446 aa17.87■□□□□ 0.45
NELFE-212ENST00000492539 TRIM64A6NGJ6 449 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 TRIM64BA6NI03 449 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 HMGB1P1B2RPK0 211 aaPredicted RBP17.86■□□□□ 0.45
NELFE-212ENST00000492539 AQP8O94778 261 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 SNUPNO95149 360 aaKnown RBP17.86■□□□□ 0.45
NELFE-212ENST00000492539 CHEK2O96017 543 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 IFI6P09912 130 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 FCGR2AP12318 317 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 TBXA2RP21731 343 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 BGNP21810 368 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 CLK3P49761 638 aaKnown RBP17.86■□□□□ 0.45
NELFE-212ENST00000492539 GGNQ86UU5 652 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 MGARPQ8TDB4 240 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 GFM2Q969S9 779 aaKnown RBP17.86■□□□□ 0.45
NELFE-212ENST00000492539 ELP4Q96EB1 424 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 MYNNQ9NPC7 610 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 DDX18Q9NVP1 670 aaKnown RBP17.86■□□□□ 0.45
NELFE-212ENST00000492539 FIS1Q9Y3D6 152 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 DNAJC15Q9Y5T4 150 aa17.86■□□□□ 0.45
NELFE-212ENST00000492539 TMEM233B4DJY2 109 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 SMAD7O15105 426 aaKnown RBP17.85■□□□□ 0.45
NELFE-212ENST00000492539 RSL1D1O76021 490 aaKnown RBP17.85■□□□□ 0.45
NELFE-212ENST00000492539 HSPA4LO95757 839 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 ANGPTL1O95841 491 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 THBDP07204 575 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 NEFHP12036 1026 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 PSMD4P55036 377 aaKnown RBP17.85■□□□□ 0.45
NELFE-212ENST00000492539 ABCE1P61221 599 aaKnown RBP17.85■□□□□ 0.45
NELFE-212ENST00000492539 PRR5P85299 388 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 C17orf67Q0P5P2 114 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 IMPG1Q17R60 797 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 UGT3A2Q3SY77 523 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 APOOLQ6UXV4 268 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 OR6K3Q8NGY3 331 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 CDC26Q8NHZ8 85 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 AMDHD1Q96NU7 426 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 MIEF1Q9NQG6 463 aa17.85■□□□□ 0.45
NELFE-212ENST00000492539 PLSCR4Q9NRQ2 329 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms