RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SLC44A2Q8IWA5 706 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-212ENST00000492407 GCNT2Q8N0V5 402 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 MMP21Q8N119 569 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 OR8H2Q8N162 312 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 OR2L13Q8N349 312 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 METTL25Q8N6Q8 603 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 OR2M3Q8NG83 312 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 OR7G2Q8NG99 324 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 OR9A2Q8NGT5 310 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.24□□□□□ -1.09
HDAC3-212ENST00000492407 RDH11Q8TC12 318 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 KAT2AQ92830 837 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 GFM2Q969S9 779 aaKnown RBP8.24□□□□□ -1.09
HDAC3-212ENST00000492407 EXOSC8Q96B26 276 aaKnown RBP8.24□□□□□ -1.09
HDAC3-212ENST00000492407 PGM2Q96G03 612 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 WFIKKN1Q96NZ8 548 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 BBS4Q96RK4 519 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 BDH2Q9BUT1 245 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 ACPTQ9BZG2 426 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 OR10A4Q9H209 315 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 RNF122Q9H9V4 155 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 Q9N2J8 555 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 NCKAP5O14513 1909 aa8.24□□□□□ -1.09
HDAC3-212ENST00000492407 NINQ8N4C6 2090 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 FLNAP21333 2647 aaKnown RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 A0A087WZY1 265 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ARPC4-TTLL3A0A0A6YYG9 625 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 A0A1W2PPR1 153 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 DEFB108AA8MXU0 73 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 NPIPB8E9PQR5 432 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 POC1B-GALNT4F8VUJ3 575 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 DLX3O60479 287 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 IL33O95760 270 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 NGFRP08138 427 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 POU2F1P14859 743 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF17P17021 662 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 HK1P19367 917 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 S100A1P23297 94 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 PSMA4P25789 261 aaKnown RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 B2MP61769 119 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 PRR5P85299 388 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 RELQ04864 619 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 FAM27E3Q08E93 113 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 SPCS2Q15005 226 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 GUSBP1Q15486 140 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 VPS26BQ4G0F5 336 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF474Q6S9Z5 364 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 CLEC9AQ6UXN8 241 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 RPS27LQ71UM5 84 aaKnown RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 TRMT10CQ7L0Y3 403 aaKnown RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 FAM214BQ7L5A3 538 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 TRIM46Q7Z4K8 759 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 EXOC3L1Q86VI1 746 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 SPARTQ8N0X7 666 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 OR8H1Q8NGG4 311 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ARSGQ96EG1 525 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 C1GALT1C1Q96EU7 318 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 GIMAP5Q96F15 307 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 APIPQ96GX9 242 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF764Q96H86 408 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF845Q96IR2 970 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 COX4I2Q96KJ9 171 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 LMF2Q9BU23 707 aaKnown RBP8.23□□□□□ -1.09
HDAC3-212ENST00000492407 MED18Q9BUE0 208 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 DSN1Q9H410 356 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 MYNNQ9NPC7 610 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 PLSCR4Q9NRQ2 329 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 GLRX2Q9NS18 164 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 TMEM216Q9P0N5 145 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 DCDC2Q9UHG0 476 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ATPIF1Q9UII2 106 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF337Q9Y3M9 751 aa8.23□□□□□ -1.09
HDAC3-212ENST00000492407 ACANP16112 2415 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 EXOC1LA0A1B0GW35 172 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 OR2M5A3KFT3 312 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 UPK1AO00322 258 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 SMNDC1O75940 238 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC3-212ENST00000492407 RSL1D1O76021 490 aaKnown RBP8.22□□□□□ -1.09
HDAC3-212ENST00000492407 KCNH1O95259 989 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 HSPA4LO95757 839 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 CHN1P15882 459 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 TSPAN8P19075 237 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 TBXA2RP21731 343 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 ECHS1P30084 290 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 NTSP30990 170 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 CPOXP36551 454 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 NCBP2P52298 156 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC3-212ENST00000492407 CLNS1AP54105 237 aaKnown RBP8.22□□□□□ -1.09
HDAC3-212ENST00000492407 CLDN15P56746 228 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 C2orf80Q0P641 193 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 POU4F3Q15319 338 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 TMEM44Q2T9K0 475 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 Q5PR19 223 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 RAET1LQ5VY80 246 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 OR5M10Q6IEU7 315 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 FAM71E1Q6IPT2 247 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 FAM180BQ6P0A1 224 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 VWA1Q6PCB0 445 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 BTLAQ7Z6A9 289 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms