RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RPL3LQ92901 407 aaKnown RBP8.73□□□□□ -1.01
BRCA1-219ENST00000491747 TESCQ96BS2 214 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 IMMP1LQ96LU5 166 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 SMAD5Q99717 465 aaKnown RBP8.73□□□□□ -1.01
BRCA1-219ENST00000491747 BARD1Q99728 777 aaKnown RBP8.73□□□□□ -1.01
BRCA1-219ENST00000491747 MAPKAP1Q9BPZ7 522 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 RASSF1Q9NS23 344 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 GPR83Q9NYM4 423 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 AASSQ9UDR5 926 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 DAPP1Q9UN19 280 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 IFT52Q9Y366 437 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 TESMINQ9Y4I5 508 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 NSG1A0A0A6YYJ2 146 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 AGAP5A6NIR3 686 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 B8ZZF3 427 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 CYR61O00622 381 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 SNPHO15079 494 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 B3GALT2O43825 422 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 LCKP06239 509 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 ITGA3P26006 1051 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 S100A5P33763 92 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 RAB38P57729 211 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 SKP1P63208 163 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF45Q02386 682 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 NSDHLQ15738 373 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 GGTA1PQ4G0N0 100 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 TMEM35AQ53FP2 167 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 ATAD3BQ5T9A4 648 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 OR4C11Q6IEV9 310 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 MSANTD1Q6ZTZ1 278 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 USP43Q70EL4 1123 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 ANKRD46Q86W74 232 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 METTL21AQ8WXB1 218 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 PSMF1Q92530 271 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 THOC3Q96J01 351 aaKnown RBP8.73□□□□□ -1.01
BRCA1-219ENST00000491747 PTCHD1Q96NR3 888 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 KCNC2Q96PR1 638 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 PITX2Q99697 317 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 RHNO1Q9BSD3 238 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 INPP5KQ9BT40 448 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 COL6A6A6NMZ7 2263 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 IGKV3D-11A0A0A0MRZ8 115 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 METTL15A6NJ78 407 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 hCG_2039718K7EN88 272 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 FOXE1O00358 373 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 TBX1O43435 398 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 PRMT3O60678 531 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 PDYNP01213 254 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 HOXB9P17482 250 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 HIST1H1TP22492 207 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 PTX3P26022 381 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 PTPN6P29350 595 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 BSGP35613 385 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 PGDP52209 483 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 C19orf57Q0VDD7 668 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 NPRL3Q12980 569 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 TBCEQ15813 527 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF362Q5T0B9 420 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 FRG2Q64ET8 278 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 QSOX2Q6ZRP7 698 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 SELENOMQ8WWX9 145 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 PROX1Q92786 737 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 REPS1Q96D71 796 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 FRG2BQ96QU4 278 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 SIGLEC11Q96RL6 698 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 SLX1AQ9BQ83 275 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 COPS4Q9BT78 406 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 ACPTQ9BZG2 426 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 C6orf62Q9GZU0 229 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 PRM3Q9NNZ6 103 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 RBMX2Q9Y388 322 aaKnown RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 TLN1Q9Y490 2541 aaKnown RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 SUV39H1O43463 412 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 WBP4O75554 376 aaKnown RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 CYC1P08574 325 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF24P17028 368 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 KDELR2P33947 212 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 CDKN2CP42773 168 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 SSR2P43308 183 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 KIR3DL1P43629 444 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 RPP38P78345 283 aaKnown RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 VLDLRP98155 873 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 VMACQ2NL98 169 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 STEAP3Q658P3 488 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 RBMXL3Q8N7X1 1067 aaKnown RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 SRFBP1Q8NEF9 429 aaKnown RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 KBTBD8Q8NFY9 601 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 UCN3Q969E3 161 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 MYDGFQ969H8 173 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 RGMAQ96B86 450 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 TSSK3Q96PN8 268 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 ELOVL6Q9H5J4 265 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 PRDM9Q9NQV7 894 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 THUMPD1Q9NXG2 353 aaKnown RBP8.72□□□□□ -1.01
BRCA1-219ENST00000491747 POU2F3Q9UKI9 436 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 FBXW2Q9UKT8 454 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 SNX6Q9UNH7 406 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 RNF6Q9Y252 685 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 DLGAP4Q9Y2H0 992 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms