RNA–Protein interactions for RNA: ENST00000490610.1

CACUL1-205, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-205ENST00000490610 SEC23BQ15437 767 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 ELAVL1Q15717 326 aaKnown RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 ZBED5Q49AG3 693 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 MINDY4Q4G0A6 757 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 TRIM61Q5EBN2 209 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 ENTPD8Q5MY95 495 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 PERM1Q5SV97 790 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 CCNJQ5T5M9 372 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 MRPL2Q5T653 305 aaKnown RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 RHBDD2Q6NTF9 364 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 ZNF730Q6ZMV8 503 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 RBM44Q6ZP01 1051 aaKnown RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 KCTD8Q6ZWB6 473 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 ARHGAP22Q7Z5H3 698 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 B3GNT8Q7Z7M8 397 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 HMGN2P46Q86SG4 172 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 CMIPQ8IY22 773 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 EID2Q8N6I1 236 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 TMEM105Q8N8V8 129 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 SIMC1Q8NDZ2 872 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 BPIFB6Q8NFQ5 453 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 OR14A16Q8NHC5 309 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 DAZLQ92904 295 aaKnown RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 SLC46A1Q96NT5 459 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 NODALQ96S42 347 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 TSC22D3Q99576 134 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 MCHR1Q99705 422 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 RSPO3Q9BXY4 272 aaPredicted RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 PRRG3Q9BZD7 231 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 RBM38Q9H0Z9 239 aaKnown RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 OR10A5Q9H207 317 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 SYNDIG1Q9H7V2 258 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 POLR1BQ9H9Y6 1135 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 NECTIN3Q9NQS3 549 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 MAN2C1Q9NTJ4 1040 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 DHCR7Q9UBM7 475 aaKnown RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 FTSJ1Q9UET6 329 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 MRTO4Q9UKD2 239 aaKnown RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 RARRES3Q9UL19 164 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 OR10H1Q9Y4A9 318 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 TMEM184BQ9Y519 407 aaPredicted RBP8.57□□□□□ -1.04
CACUL1-205ENST00000490610 CLDN16Q9Y5I7 305 aa8.57□□□□□ -1.04
CACUL1-205ENST00000490610 IGHV5-10-1A0A0J9YXX1 117 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 GXYLT2A0PJZ3 443 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 SH3D21A4FU49 640 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 TRAPPC13A5PLN9 417 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 CDHR4A6H8M9 788 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 CPSF4LA6NMK7 179 aaKnown RBP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 POLR1CO15160 346 aaPredicted RBP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ZNF883P0CG24 379 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 AGXTP21549 392 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 CHMP24386 653 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 EPHA2P29317 976 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 LCN1P31025 176 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 FMO3P31513 532 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 RORAP35398 523 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 KRT20P35900 424 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 DCAF7P61962 342 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 PSPHP78330 225 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 RHAGQ02094 409 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 TRA2AQ13595 282 aaKnown RBP eCLIP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ZNF141Q15928 474 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 DECR1Q16698 335 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 CNPY1Q3B7I2 92 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 C11orf91Q3C1V1 193 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 C1orf94Q6P1W5 598 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 DGAT2L6Q6ZPD8 337 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 GRAMD2AQ8IUY3 354 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 SLITRK4Q8IW52 837 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 TMEM151BQ8IW70 566 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ENTHD1Q8IYW4 607 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 CLIP4Q8N3C7 705 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ZNF527Q8NB42 609 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 MORN4Q8NDC4 146 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ZNF540Q8NDQ6 660 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 C16orf52Q8NHV5 167 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ZNF420Q8TAQ5 688 aaPredicted RBP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 IFI44Q8TCB0 444 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 GNPDA2Q8TDQ7 276 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 DOK4Q8TEW6 326 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ACOT11Q8WXI4 607 aaPredicted RBP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ZG16BQ96DA0 208 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 SLC41A3Q96GZ6 507 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 LOXL4Q96JB6 756 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 CCDC74BQ96LY2 380 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 NECAB3Q96P71 396 aaPredicted RBP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 GFM1Q96RP9 751 aaKnown RBP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 WFDC6Q9BQY6 131 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 ZNF559Q9BR84 538 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 TEX12Q9BXU0 123 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 YIPF3Q9GZM5 350 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 HOXD1Q9GZZ0 328 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 PNO1Q9NRX1 252 aaKnown RBP8.56□□□□□ -1.04
CACUL1-205ENST00000490610 RASSF1Q9NS23 344 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 PLCXD1Q9NUJ7 323 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 CLN6Q9NWW5 311 aa8.56□□□□□ -1.04
CACUL1-205ENST00000490610 COPS7AQ9UBW8 275 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms