RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 RNF175Q8N4F7 328 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 TAF15Q92804 592 aaKnown RBP eCLIP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 ZBTB8AQ96BR9 441 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 LRRC58Q96CX6 371 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 FBXO17Q96EF6 278 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PTCD3Q96EY7 689 aaKnown RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PDLIM5Q96HC4 596 aaKnown RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 C20orf173Q96LM9 149 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 C1orf147Q96MC9 270 aaPredicted RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 SERPINB12Q96P63 405 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 NPAS1Q99742 590 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 LRRC1Q9BTT6 524 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 EFCAB11Q9BUY7 163 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 OR51B5Q9H339 312 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 SMYD2Q9NRG4 433 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 IARS2Q9NSE4 1012 aaKnown RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 LYARQ9NX58 379 aaKnown RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PAQR5Q9NXK6 330 aaPredicted RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 MAT2BQ9NZL9 334 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PPP4R1LQ9P1A2 415 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 CFL2Q9Y281 166 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 GPR55Q9Y2T6 319 aaPredicted RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PLLPQ9Y342 182 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PPIAL4AQ9Y536 164 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 SLC25A15Q9Y619 301 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 A0A0J9YW62 118 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 NPEPPSL1A6NEC2 478 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 TNFSF11O14788 317 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 TAPBPO15533 448 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 SCO2O43819 266 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 FADS1O60427 444 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 PDE5AO76074 875 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 SNUPNO95149 360 aaKnown RBP6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 SYNGR4O95473 234 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 PNPP00491 289 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 MSMBP08118 114 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 CT45A8P0DMV1 189 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 CT45A9P0DMV2 189 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 CPMP14384 443 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 GGT1P19440 569 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 TPSB2P20231 275 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 RAB6AP20340 208 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 MDKP21741 143 aaPredicted RBP6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 IGHV1-2P23083 117 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 PRTN3P24158 256 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 PSMA4P25789 261 aaKnown RBP6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 EVI2BP34910 448 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 MAGEA1P43355 309 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 OR3A2P47893 321 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 KHKP50053 298 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 ZNF83P51522 516 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 UBASH3AP57075 661 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 PHC1P78364 1004 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 EFR3AQ14156 821 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 SLMAPQ14BN4 828 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 TPSAB1Q15661 275 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 ZNF239Q16600 458 aaKnown RBP6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 PRICKLE4Q2TBC4 344 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 HSP90AA5PQ58FG0 334 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 CT45A2Q5DJT8 189 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 TMEM201Q5SNT2 666 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 VAX1Q5SQQ9 334 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 ANKRD22Q5VYY1 191 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 OR52E8Q6IFG1 317 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 NPSR1Q6W5P4 371 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 C1QL2Q7Z5L3 287 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 LAS2Q8IYD9 372 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 ZNF433Q8N7K0 673 aaPredicted RBP6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 LRRC57Q8N9N7 239 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 SYT14Q8NB59 555 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 ADCY4Q8NFM4 1077 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 OR2W6PQ8NHA6 318 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 OR2V1Q8NHB1 315 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 LRRC37BQ96QE4 947 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 EGFL8Q99944 293 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 TMEM79Q9BSE2 394 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 TSGA10Q9BZW7 698 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 NAT10Q9H0A0 1025 aaKnown RBP6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 GP6Q9HCN6 339 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 SAYSD1Q9NPB0 183 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 MYNNQ9NPC7 610 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 G6PC2Q9NQR9 355 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 ABHD10Q9NUJ1 306 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 DDX28Q9NUL7 540 aaKnown RBP6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 LMBRD1Q9NUN5 540 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 SLC17A6Q9P2U8 582 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 PRSS50Q9UI38 385 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 GRIP1Q9Y3R0 1128 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 CSMD3Q7Z407 3707 aa6.19□□□□□ -1.42
PDLIM1-203ENST00000490391 IGLV3-32A0A0A0MS00 114 aa6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 CCT8L1PA6NM43 557 aa6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 NME6O75414 186 aaPredicted RBP6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 FSHBP01225 129 aa6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 AHSGP02765 367 aa6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 OPN1LWP04000 364 aa6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 CCDC175P0C221 793 aa6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 FAM58BPP0C7Q3 252 aa6.18□□□□□ -1.42
PDLIM1-203ENST00000490391 CTAGE8P0CG41 777 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms