RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 UBQLN4Q9NRR5 601 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.04□□□□□ -0.32
VPS26A-205ENST00000489656 VNN3Q9NY84 501 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 MYOTQ9UBF9 498 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 OAZ3Q9UMX2 235 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
VPS26A-205ENST00000489656 DTNAQ9Y4J8 743 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 MPDZO75970 2070 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 MED13Q9UHV7 2174 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 A0A1W2PQD3 144 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 SAC3D1A6NKF1 404 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 M0R3H8 397 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 SEMA7AO75326 666 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 REM1O75628 298 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 PPM1BO75688 479 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 DIRAS1O95057 198 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 UTS2O95399 124 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 CYP4B1P13584 511 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 FPR1P21462 350 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 IL12BP29460 328 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 DNAJA1P31689 397 aaKnown RBP13.03□□□□□ -0.32
VPS26A-205ENST00000489656 KRT20P35900 424 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 RFX3P48380 749 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 HMGA2P52926 109 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 CHAF1BQ13112 559 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 IL10RAQ13651 578 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 EFR3AQ14156 821 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 NPTX1Q15818 432 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 KLHL26Q53HC5 615 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 FNDC7Q5VTL7 733 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 SHQ1Q6PI26 577 aaKnown RBP13.03□□□□□ -0.32
VPS26A-205ENST00000489656 MRGPREQ86SM8 312 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 HIPK1Q86Z02 1210 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 RBM45Q8IUH3 476 aaKnown RBP13.03□□□□□ -0.32
VPS26A-205ENST00000489656 IL22RA1Q8N6P7 574 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF527Q8NB42 609 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 FAM71CQ8NEG0 241 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 OR6T1Q8NGN1 323 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 VANGL1Q8TAA9 524 aaPredicted RBP13.03□□□□□ -0.32
VPS26A-205ENST00000489656 PRRC1Q96M27 445 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 CIB1Q99828 191 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 WFDC6Q9BQY6 131 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 POLR2J2Q9GZM3 115 aaKnown RBP13.03□□□□□ -0.32
VPS26A-205ENST00000489656 GABARAPL1Q9H0R8 117 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 POLR2J3Q9H1A7 115 aaKnown RBP13.03□□□□□ -0.32
VPS26A-205ENST00000489656 VCXQ9H320 206 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 COQ10BQ9H8M1 238 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 REEP1Q9H902 201 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 P4HTMQ9NXG6 502 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 SLC35A3Q9Y2D2 325 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 NPFFR2Q9Y5X5 522 aa13.03□□□□□ -0.32
VPS26A-205ENST00000489656 CDC14CA4D256 554 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 SERINC4A6NH21 518 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 CLDN24A6NM45 220 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 G3V2T6 193 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 FFAR1O14842 300 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 HS6ST1O60243 411 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 FMO6PO60774 539 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 RASAL1O95294 804 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 OXSR1O95747 527 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF23P17027 643 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 ENDOUP21128 410 aaKnown RBP13.02□□□□□ -0.33
VPS26A-205ENST00000489656 RRM2P31350 389 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 LIMS1P48059 325 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF136P52737 540 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 RGS8P57771 180 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-205ENST00000489656 PLAURQ03405 335 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 LRRC36Q1X8D7 754 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 ZBTB49Q6ZSB9 765 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 TMEM179BQ7Z7N9 219 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 ZDHHC13Q8IUH4 622 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 AMER2Q8N7J2 671 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 PIK3C3Q8NEB9 887 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 OR4C15Q8NGM1 316 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 OR4C3Q8NH37 302 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 SLC22A8Q8TCC7 542 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 RNF138Q8WVD3 245 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 KIAA1143Q96AT1 154 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-205ENST00000489656 NXPE2Q96DL1 559 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 ADOQ96SZ5 270 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 KRTAP3-3Q9BYR6 98 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 KRTAP3-2Q9BYR7 98 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 GPN2Q9H9Y4 310 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF160Q9HCG1 818 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 ACER3Q9NUN7 267 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 RLIMQ9NVW2 624 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 FBXL4Q9UKA2 621 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 A4GNTQ9UNA3 340 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 SAMHD1Q9Y3Z3 626 aaKnown RBP13.02□□□□□ -0.33
VPS26A-205ENST00000489656 LYVE1Q9Y5Y7 322 aa13.02□□□□□ -0.33
VPS26A-205ENST00000489656 DCDC2BA2VCK2 349 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 J3KTA2 159 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 WWP2O00308 870 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 SCDO00767 359 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 SOCS2O14508 198 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 TPST2O60704 377 aa13.01□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF354AO60765 605 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-205ENST00000489656 UGT2B11O75310 529 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms