RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 P2RX2Q9UBL9 471 aa7.56□□□□□ -1.2
SF1-218ENST00000489544 TNFRSF10DQ9UBN6 386 aa7.56□□□□□ -1.2
SF1-218ENST00000489544 TAGLN3Q9UI15 199 aa7.56□□□□□ -1.2
SF1-218ENST00000489544 NPIPA1Q9UND3 350 aa7.56□□□□□ -1.2
SF1-218ENST00000489544 WDR45Q9Y484 360 aa7.56□□□□□ -1.2
SF1-218ENST00000489544 WIF1Q9Y5W5 379 aa7.56□□□□□ -1.2
SF1-218ENST00000489544 LIPGQ9Y5X9 500 aa7.56□□□□□ -1.2
SF1-218ENST00000489544 NINQ8N4C6 2090 aa7.56□□□□□ -1.2
SF1-218ENST00000489544 SHISA8B8ZZ34 492 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 ALG1L2C9J202 215 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 NME4O00746 187 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 SCDO00767 359 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 TFECO14948 347 aaPredicted RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 SNPHO15079 494 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 NDUFB5O43674 189 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 KIAA0513O60268 411 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 CDC40O60508 579 aaKnown RBP eCLIP7.55□□□□□ -1.21e-8■□□□□ 10.6
SF1-218ENST00000489544 CYP7B1O75881 506 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 SNX4O95219 450 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 WISP1O95388 367 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 AGR2O95994 175 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 AK1P00568 194 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 T-ENOLP0DO92 83 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 ARAFP10398 606 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 HPGDP15428 266 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 PPIBP23284 216 aaKnown RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 PRDX6P30041 224 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 ANXA11P50995 505 aaKnown RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 TDGF1P3P51864 188 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 SLC7A2P52569 658 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 PSME3P61289 254 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 HPCAP84074 193 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 SLC25A3Q00325 362 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 CDK6Q00534 326 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 PLAURQ03405 335 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 KRT72Q14CN4 511 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 TOMM20Q15388 145 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 CYP51A1Q16850 503 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 KLHL26Q53HC5 615 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 EIPR1Q53HC9 387 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 CMPK2Q5EBM0 449 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 TBCELQ5QJ74 424 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 FAM91A1Q658Y4 838 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 C8orf82Q6P1X6 216 aaPredicted RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 TMEM81Q6P7N7 255 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 CBLN3Q6UW01 205 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 LRRC74BQ6ZQY2 392 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 YRDCQ86U90 279 aaKnown RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 IFNEQ86WN2 208 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 VRK2Q86Y07 508 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 PLCZ1Q86YW0 608 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 SPPL2CQ8IUH8 684 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 SLC15A3Q8IY34 581 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 ZZZ3Q8IYH5 903 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 FAM98AQ8NCA5 519 aaKnown RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 OR1J4Q8NGS1 313 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 DNAJB8Q8NHS0 232 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 NR4A3Q92570 626 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 ZNF524Q96C55 264 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 ZNF597Q96LX8 424 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 BARD1Q99728 777 aaKnown RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 NPAS1Q99742 590 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 TREX2Q9BQ50 279 aaPredicted RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 SAP130Q9H0E3 1048 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 RAD21L1Q9H4I0 556 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 ZNF703Q9H7S9 590 aaPredicted RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 A4GALTQ9NPC4 353 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 PPP4R1LQ9P1A2 415 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 BOKQ9UMX3 212 aaPredicted RBP7.55□□□□□ -1.2
SF1-218ENST00000489544 ABCG2Q9UNQ0 655 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 LIPT1Q9Y234 373 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 CARD8Q9Y2G2 431 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 C15orf41Q9Y2V0 281 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 GMEB1Q9Y692 573 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 CFAP46Q8IYW2 2715 aa7.55□□□□□ -1.2
SF1-218ENST00000489544 SERINC4A6NH21 518 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 AGAP5A6NIR3 686 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 C5orf58C9J3I9 102 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 HCRTR2O43614 444 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 GCM2O75603 506 aaPredicted RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 TRAPPC6AO75865 159 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 UBOX5O94941 541 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 SOX30O94993 753 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 PGM3O95394 542 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 NPPAP01160 153 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 CRYABP02511 175 aaKnown RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 NGFRP08138 427 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 UBTFL6P0CB48 400 aaPredicted RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 ESRRAP11474 423 aaPredicted RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 GDF1P27539 372 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 MAGEA8P43361 318 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 UQCRFS1P47985 274 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 CRISP3P54108 245 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 TXNL4AP83876 142 aaKnown RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 ZNF117Q03924 483 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 MRPL49Q13405 166 aaKnown RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 SNTA1Q13424 505 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 SCARB2Q14108 478 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 TOMM34Q15785 309 aaPredicted RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 ZNF141Q15928 474 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms