RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 ANKRD34AQ69YU3 496 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 NOXRED1Q6NXP6 359 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 OR4C3Q8NH37 302 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 OR2W6PQ8NHA6 318 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 ZC3HAV1LQ96H79 300 aaKnown RBP10.54□□□□□ -0.72
ACTN4-206ENST00000489451 FCRL1Q96LA6 429 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 MED18Q9BUE0 208 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 ZNF395Q9H8N7 513 aaPredicted RBP10.54□□□□□ -0.72
ACTN4-206ENST00000489451 UBTD1Q9HAC8 227 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 Q9N2J8 555 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 DDX18Q9NVP1 670 aaKnown RBP10.54□□□□□ -0.72
ACTN4-206ENST00000489451 FBXO34Q9NWN3 711 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 OXSMQ9NWU1 459 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 ELOVL5Q9NYP7 299 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.54□□□□□ -0.722e-6■■■□□ 15.7
ACTN4-206ENST00000489451 CLEC4AQ9UMR7 237 aa10.54□□□□□ -0.72
ACTN4-206ENST00000489451 V9GYY5 206 aaPredicted RBP10.54□□□□□ -0.72
ACTN4-206ENST00000489451 C16orf97H3BN30 126 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 SMPD2O60906 423 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 NKX2-2O95096 273 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 OXSR1O95747 527 aaPredicted RBP10.53□□□□□ -0.72
ACTN4-206ENST00000489451 PLAUP00749 431 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 IFI6P09912 130 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 ACP2P11117 423 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 PRPH2P23942 346 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 NTSP30990 170 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 GABRA3P34903 492 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 FRKP42685 505 aaPredicted RBP10.53□□□□□ -0.72
ACTN4-206ENST00000489451 MRPS22P82650 360 aaKnown RBP10.53□□□□□ -0.72
ACTN4-206ENST00000489451 OCRLQ01968 901 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 HSPB3Q12988 150 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 CAPRIN1Q14444 709 aaKnown RBP10.53□□□□□ -0.72
ACTN4-206ENST00000489451 IMPG1Q17R60 797 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 GLYR1Q49A26 553 aaPredicted RBP10.53□□□□□ -0.72
ACTN4-206ENST00000489451 LIPMQ5VYY2 423 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 CLEC6AQ6EIG7 209 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 Q6ZSR9 355 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 FAM214BQ7L5A3 538 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 FAM76AQ8TAV0 307 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 FBXO30Q8TB52 745 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 POC1BQ8TC44 478 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 FAM110BQ8TC76 370 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 GFM2Q969S9 779 aaKnown RBP10.53□□□□□ -0.72
ACTN4-206ENST00000489451 PERPQ96FX8 193 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 APOPT1Q96IL0 206 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 TRMOQ9BU70 441 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 PARD6BQ9BYG5 372 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 TUBB1Q9H4B7 451 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 EQTNQ9NQ60 294 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 MIEF1Q9NQG6 463 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 ZNF226Q9NYT6 803 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 NTMQ9P121 344 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 LGALS13Q9UHV8 139 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 AP4B1Q9Y6B7 739 aa10.53□□□□□ -0.72
ACTN4-206ENST00000489451 FREM1Q5H8C1 2179 aa10.52□□□□□ -0.72
ACTN4-206ENST00000489451 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 ALG1L2C9J202 215 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 LINC01387J3KSC0 135 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 TRIM13O60858 407 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 SS18L1O75177 396 aaPredicted RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 CHEK2O96017 543 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 OPN1LWP04000 364 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 SDC1P18827 310 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 IL11P20809 199 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 SHC1P29353 583 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 EEFSECP57772 596 aaKnown RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PPP2R2BQ00005 443 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 C17orf67Q0P5P2 114 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PDE7AQ13946 482 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 CD226Q15762 336 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PLPPR5Q32ZL2 321 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PRSS57Q6UWY2 283 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 STAC2Q6ZMT1 411 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 IKBIPQ70UQ0 350 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 CHMP1BQ7LBR1 199 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 YTHDF3Q7Z739 585 aaKnown RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 TRABD2AQ86V40 505 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PHC2Q8IXK0 858 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 MREGQ8N565 214 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 GATSQ8NAP1 163 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 SLC16A11Q8NCK7 471 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 OR10D3Q8NH80 312 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 SLC9A6Q92581 669 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PIGTQ969N2 578 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 ZNF524Q96C55 264 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 DTNBP1Q96EV8 351 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 OTUB1Q96FW1 271 aaPredicted RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 ZNF764Q96H86 408 aaPredicted RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 CCL19Q99731 98 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 TBL1XR1Q9BZK7 514 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PTGES2Q9H7Z7 377 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 EML4Q9HC35 981 aaKnown RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 RRAGDQ9NQL2 400 aaPredicted RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 SDHAF3Q9NRP4 125 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PLSCR4Q9NRQ2 329 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 SIRT3Q9NTG7 399 aaPredicted RBP10.52□□□□□ -0.73
ACTN4-206ENST00000489451 MKS1Q9NXB0 559 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 PROCRQ9UNN8 238 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 VDAC3Q9Y277 283 aa10.52□□□□□ -0.73
ACTN4-206ENST00000489451 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms