RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 EVA1AQ9H8M9 152 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 MYOTQ9UBF9 498 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 SAMHD1Q9Y3Z3 626 aaKnown RBP19.22■□□□□ 0.67
SND1-214ENST00000489417 SERINC4A6NH21 518 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 PDLIM1O00151 329 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 ABCB7O75027 752 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 PPM1BO75688 479 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 OXSR1O95747 527 aaPredicted RBP19.21■□□□□ 0.67
SND1-214ENST00000489417 ICAM2P13598 275 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 DNAJA1P31689 397 aaKnown RBP19.21■□□□□ 0.67
SND1-214ENST00000489417 PPP1R8Q12972 351 aaKnown RBP19.21■□□□□ 0.67
SND1-214ENST00000489417 TGIF1Q15583 401 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 KLHL26Q53HC5 615 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 TMEM179BQ7Z7N9 219 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 CMIPQ8IY22 773 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 KBTBD2Q8IY47 623 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 CBR4Q8N4T8 237 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 SLC22A8Q8TCC7 542 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 ADAMTS17Q8TE56 1095 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 EPYCQ99645 322 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 VCXQ9H320 206 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 CNOT11Q9UKZ1 510 aaKnown RBP19.21■□□□□ 0.67
SND1-214ENST00000489417 U3KQV3 271 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 DMXL1Q9Y485 3027 aa19.21■□□□□ 0.67
SND1-214ENST00000489417 KNTC1P50748 2209 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 OR6C70A6NIJ9 312 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 SCDO00767 359 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 SOCS2O14508 198 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 ICOSLGO75144 302 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 SEMA7AO75326 666 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 HPGDP15428 266 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 NAGAP17050 411 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 FPR1P21462 350 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 TBXA2RP21731 343 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 CDH12P55289 794 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 PLAURQ03405 335 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 EFR3AQ14156 821 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 PPP4R4Q6NUP7 873 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 SHQ1Q6PI26 577 aaKnown RBP19.2■□□□□ 0.66
SND1-214ENST00000489417 IZUMO2Q6UXV1 221 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 HIPK1Q86Z02 1210 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 ZDHHC13Q8IUH4 622 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 GRAMD2AQ8IUY3 354 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 CNOT9Q92600 299 aaKnown RBP19.2■□□□□ 0.66
SND1-214ENST00000489417 SDCCAG3Q96C92 435 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 NXPE2Q96DL1 559 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 SLC29A1Q99808 456 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 C8orf4Q9NR00 106 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 ACAD8Q9UKU7 415 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 LYVE1Q9Y5Y7 322 aa19.2■□□□□ 0.66
SND1-214ENST00000489417 G3V2T6 193 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 TNFRSF11BO00300 401 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 AP3D1O14617 1153 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 FFAR1O14842 300 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 ZNF354AO60765 605 aaPredicted RBP19.19■□□□□ 0.66
SND1-214ENST00000489417 UGT2B11O75310 529 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 BCAS1O75363 584 aaPredicted RBP19.19■□□□□ 0.66
SND1-214ENST00000489417 OR2J2O76002 312 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 NGFRP08138 427 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 LIFP15018 202 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 ZNF26P17031 533 aaPredicted RBP19.19■□□□□ 0.66
SND1-214ENST00000489417 ATP1A4Q13733 1029 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 GANABQ14697 944 aaKnown RBP19.19■□□□□ 0.66
SND1-214ENST00000489417 DESI1Q6ICB0 168 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 GALNT4Q8N4A0 578 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 SLC15A4Q8N697 577 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 PACRGLQ8N7B6 248 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 PHF10Q8WUB8 498 aaKnown RBP19.19■□□□□ 0.66
SND1-214ENST00000489417 PRRC1Q96M27 445 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 IP6K3Q96PC2 410 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 MCHR1Q99705 422 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 ZBTB20Q9HC78 741 aaPredicted RBP19.19■□□□□ 0.66
SND1-214ENST00000489417 DNAJB12Q9NXW2 375 aaKnown RBP19.19■□□□□ 0.66
SND1-214ENST00000489417 RHCGQ9UBD6 479 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 A4GNTQ9UNA3 340 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 SLC35A3Q9Y2D2 325 aa19.19■□□□□ 0.66
SND1-214ENST00000489417 PCSK5Q92824 1860 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 TRABD2BA6NFA1 517 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 MASP2O00187 686 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 RASAL1O95294 804 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 CSTAP01040 98 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 ITGAMP11215 1152 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 ADH7P40394 386 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 ARHGDIAP52565 204 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 ZNF136P52737 540 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 HOXC5Q00444 222 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 Q0VFX4 171 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 FOXC1Q12948 553 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 FNDC7Q5VTL7 733 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 TBPL2Q6SJ96 375 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 LYPD8Q6UX82 237 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 STK32CQ86UX6 486 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 RANBP3LQ86VV4 465 aaPredicted RBP19.18■□□□□ 0.66
SND1-214ENST00000489417 OR4C15Q8NGM1 316 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 NR4A3Q92570 626 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 SLC35B4Q969S0 331 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 NRBF2Q96F24 287 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 DHRS1Q96LJ7 313 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 ACER3Q9NUN7 267 aa19.18■□□□□ 0.66
SND1-214ENST00000489417 PRDM4Q9UKN5 801 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms