RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 NPRL2Q8WTW4 380 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 COQ2Q96H96 371 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 SH3YL1Q96HL8 342 aaPredicted RBP3.45□□□□□ -1.86
XRN1-213ENST00000489241 ZNF597Q96LX8 424 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 TGM7Q96PF1 710 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 NPAS2Q99743 824 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ATF6BQ99941 703 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CHCHD5Q9BSY4 110 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 TMEM43Q9BTV4 400 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 TUBB1Q9H4B7 451 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 JPT2Q9H910 190 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 FANCFQ9NPI8 374 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ABCC13Q9NSE7 274 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 HYPKQ9NX55 129 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 PIPOXQ9P0Z9 390 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CTSZQ9UBR2 303 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 LCMT1Q9UIC8 334 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CRLS1Q9UJA2 301 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 TRAV26-1A0A087WT03 109 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 B4GALT2O60909 372 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 F10P00742 488 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 HBQ1P09105 142 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 LAP3P28838 519 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 HPCAL1P37235 193 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 GRIA1P42261 906 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 CSTF1Q05048 431 aaKnown RBP3.44□□□□□ -1.86
XRN1-213ENST00000489241 RGS1Q08116 209 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 ELAVL3Q14576 367 aaKnown RBP3.44□□□□□ -1.86
XRN1-213ENST00000489241 FILIP1LQ4L180 1135 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 ZSCAN25Q6NSZ9 544 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 ACSM5Q6NUN0 579 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 FAM71F2Q6NXP2 309 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 KCNIP4Q6PIL6 250 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 DOK6Q6PKX4 331 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 REG3GQ6UW15 175 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 EFL1Q7Z2Z2 1120 aaKnown RBP3.44□□□□□ -1.86
XRN1-213ENST00000489241 C16orf62Q7Z3J2 963 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 ACOT1Q86TX2 421 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 CDH26Q8IXH8 852 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 PHC2Q8IXK0 858 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 BPIFB2Q8N4F0 458 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 C4orf32Q8N8J7 132 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 ZSCAN4Q8NAM6 433 aaPredicted RBP3.44□□□□□ -1.86
XRN1-213ENST00000489241 BEST4Q8NFU0 473 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 RFESDQ8TAC1 157 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 NT5C3BQ969T7 300 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 ZNF689Q96CS4 500 aaPredicted RBP3.44□□□□□ -1.86
XRN1-213ENST00000489241 PELI1Q96FA3 418 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 SLC6A7Q99884 636 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 CRNKL1Q9BZJ0 848 aaKnown RBP3.44□□□□□ -1.86
XRN1-213ENST00000489241 TM9SF3Q9HD45 589 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 UFSP2Q9NUQ7 469 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 MUTYHQ9UIF7 546 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 RNF24Q9Y225 148 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 MYH15Q9Y2K3 1946 aa3.44□□□□□ -1.86
XRN1-213ENST00000489241 IGHV3OR16-12A0A075B7B8 117 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 A0A1W2PNV4 684 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 XKRY2A2RUG3 117 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 TRABD2BA6NFA1 517 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 ERI2A8K979 691 aaKnown RBP3.43□□□□□ -1.86
XRN1-213ENST00000489241 OR7A17O14581 309 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 TPST2O60704 377 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 SNRPCP09234 159 aaKnown RBP3.43□□□□□ -1.86
XRN1-213ENST00000489241 PVRP15151 417 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 SDC1P18827 310 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 PGCP20142 388 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 IGFBP5P24593 272 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 BDH1Q02338 343 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 TMEM44Q2T9K0 475 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 KCTD21Q4G0X4 260 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 VWA2Q5GFL6 755 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 FAM120AOSQ5T036 256 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 DCST2Q5T1A1 773 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 LRRC75A-AS1Q8N1F1 130 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 ARL14Q8N4G2 192 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 STXBP6Q8NFX7 210 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 OR5D13Q8NGL4 314 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 OR4D5Q8NGN0 318 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 FBXO32Q969P5 355 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 SDSLQ96GA7 329 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 PIWIL1Q96J94 861 aaKnown RBP3.43□□□□□ -1.86
XRN1-213ENST00000489241 C18orf12Q96KH6 178 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 C7orf34Q96L11 122 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 C12orf66Q96MD2 445 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 RBM4BQ9BQ04 359 aaKnown RBP3.43□□□□□ -1.86
XRN1-213ENST00000489241 LRRC61Q9BV99 259 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 FN3KRPQ9HA64 309 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 AMBNQ9NP70 447 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 SMOXQ9NWM0 555 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 FAM120CQ9NX05 1096 aaKnown RBP3.43□□□□□ -1.86
XRN1-213ENST00000489241 ELOVL2Q9NXB9 296 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 AIPL1Q9NZN9 384 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 PCSK1NQ9UHG2 260 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 RPH3ALQ9UNE2 315 aa3.43□□□□□ -1.86
XRN1-213ENST00000489241 MRPL11Q9Y3B7 192 aaKnown RBP3.43□□□□□ -1.86
XRN1-213ENST00000489241 IGHV3OR16-10A0A075B7F0 116 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 A0A1B0GU03 582 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 NPIPA7E9PJI5 369 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 SRPX2O60687 465 aaPredicted RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 TRIM3O75382 744 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms