RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 IL9RQ01113 521 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 MECOMQ03112 1051 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 CHIT1Q13231 466 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 SNX1Q13596 522 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 IMMTQ16891 758 aaKnown RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 FILIP1LQ4L180 1135 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 CAVIN4Q5BKX8 364 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 RIPPLY2Q5TAB7 128 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 LGSNQ5TDP6 509 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 ZYG11AQ6WRX3 759 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 TMEM26Q6ZUK4 368 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 CTAGE6Q86UF2 777 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 CDH26Q8IXH8 852 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 IQCF2Q8IXL9 164 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 EFCAB13Q8IY85 973 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 DRAXINQ8NBI3 349 aaPredicted RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 OR56B2PQ8NGI1 322 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 OR13F1Q8NGS4 319 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 P3H4Q92791 437 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 TADA1Q96BN2 335 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 DNAJA3Q96EY1 480 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 VSIG2Q96IQ7 327 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 SAMD8Q96LT4 415 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 GSDMAQ96QA5 445 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 KIR2DL4Q99706 377 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 SH3GL3Q99963 347 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 THUMPD2Q9BTF0 503 aaKnown RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 NDUFAF3Q9BU61 184 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 CARD6Q9BX69 1037 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 HCAR1Q9BXC0 346 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 ERVK-6Q9BXR3 956 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 RAB17Q9H0T7 212 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 COQ10BQ9H8M1 238 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 DDX18Q9NVP1 670 aaKnown RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 AIPL1Q9NZN9 384 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 PURGQ9UJV8 347 aaKnown RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 FZR1Q9UM11 496 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 BARX2Q9UMQ3 279 aaPredicted RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 ASB3Q9Y575 518 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 FLVCR1Q9Y5Y0 555 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 NPC1L1Q9UHC9 1359 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 RALGAPA1Q6GYQ0 2036 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 TRBV7-9A0A0J9YWB2 115 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 MAGEB3O15480 346 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 AK1P00568 194 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 P0C879 139 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 CCDC166P0CW27 439 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 SDC1P18827 310 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 CHMLP26374 656 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 PRDX6P30041 224 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 AKT2P31751 481 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 ASMTP46597 345 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 ALDH3B2P48448 385 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 DHPSP49366 369 aaPredicted RBP2.84□□□□□ -1.95
SSR1-209ENST00000488834 SGSHP51688 502 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 IL18R1Q13478 541 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 DPYSQ14117 519 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 MXD4Q14582 209 aaPredicted RBP2.84□□□□□ -1.95
SSR1-209ENST00000488834 PPP1R7Q15435 360 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 CEBPEQ15744 281 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 PARP6Q2NL67 630 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 GLYR1Q49A26 553 aaPredicted RBP2.84□□□□□ -1.95
SSR1-209ENST00000488834 C2orf83Q53S99 150 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 BEND6Q5SZJ8 279 aaPredicted RBP2.84□□□□□ -1.95
SSR1-209ENST00000488834 AP1ARQ63HQ0 302 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 AFTPHQ6ULP2 937 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 VPS36Q86VN1 386 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 OR52M1Q8NGK5 317 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 WDR36Q8NI36 951 aaKnown RBP2.84□□□□□ -1.95
SSR1-209ENST00000488834 FNDC8Q8TC99 324 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 C17orf50Q8WW18 174 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 DLX4Q92988 240 aaPredicted RBP2.84□□□□□ -1.95
SSR1-209ENST00000488834 RIBC2Q9H4K1 309 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 RPAP3Q9H6T3 665 aaPredicted RBP2.84□□□□□ -1.95
SSR1-209ENST00000488834 TRPV5Q9NQA5 729 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 GDAP2Q9NXN4 497 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 ANKMY1Q9P2S6 941 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 CFAP45Q9UL16 551 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 ZNF490Q9ULM2 529 aaPredicted RBP2.84□□□□□ -1.95
SSR1-209ENST00000488834 KLHDC2Q9Y2U9 406 aa2.84□□□□□ -1.95
SSR1-209ENST00000488834 NSD2O96028 1365 aa2.84□□□□□ -1.96
SSR1-209ENST00000488834 KIAA1107Q9UPP5 1409 aa2.84□□□□□ -1.96
SSR1-209ENST00000488834 ATRXP46100 2492 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 IGKV6D-21A0A0A0MT36 114 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 EPOPA6NHQ4 379 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 ZFP92A6NM28 416 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 H3BMH7 237 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.83□□□□□ -1.96
SSR1-209ENST00000488834 PDLIM1O00151 329 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 LGALS8O00214 317 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 CXCL11O14625 94 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 ANGPT2O15123 496 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 NOL4O94818 638 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 PGK1P00558 417 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 SLC35G4P0C7Q5 338 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 GLRA2P23416 452 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 IGFBP5P24593 272 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 U2AF2P26368 475 aaKnown RBP eCLIP2.83□□□□□ -1.962e-7■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms