RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ATP12AP54707 1039 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 CD226Q15762 336 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 ZNF141Q15928 474 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 C3AR1Q16581 482 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 EMC4Q5J8M3 183 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 TYW3Q6IPR3 259 aaKnown RBP16.96■□□□□ 0.31
PTCD3-217ENST00000488801 MISPQ8IVT2 679 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 PRR7Q8TB68 274 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 FAM57AQ8TBR7 257 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 PNPT1Q8TCS8 783 aaKnown RBP16.96■□□□□ 0.31
PTCD3-217ENST00000488801 ROPN1LQ96C74 230 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 TBL1XR1Q9BZK7 514 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 HOXD1Q9GZZ0 328 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 SDHAF3Q9NRP4 125 aa16.96■□□□□ 0.31
PTCD3-217ENST00000488801 LEF1Q9UJU2 399 aaPredicted RBP16.96■□□□□ 0.31
PTCD3-217ENST00000488801 DSPPQ9NZW4 1301 aa16.96■□□□□ 0.3
PTCD3-217ENST00000488801 CENPVL1A0A0U1RR11 272 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 WIPF3A6NGB9 483 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 SLC22A2O15244 555 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 PDE9AO76083 593 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 ANP32DO95626 131 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 ATP6V1C1P21283 382 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 CRYZQ08257 329 aaKnown RBP16.95■□□□□ 0.3
PTCD3-217ENST00000488801 C17orf67Q0P5P2 114 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 SF3A3Q12874 501 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTCD3-217ENST00000488801 KLF10Q13118 480 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 FADDQ13158 208 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 UBAP2LQ14157 1087 aaKnown RBP16.95■□□□□ 0.3
PTCD3-217ENST00000488801 GANABQ14697 944 aaKnown RBP16.95■□□□□ 0.3
PTCD3-217ENST00000488801 FLYWCH1Q4VC44 716 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 EIPR1Q53HC9 387 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 OR5M10Q6IEU7 315 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 OLIG3Q7RTU3 272 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 C16orf62Q7Z3J2 963 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 SPATA21Q7Z572 469 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 MTERF4Q7Z6M4 381 aaKnown RBP16.95■□□□□ 0.3
PTCD3-217ENST00000488801 FAM26EQ8N5C1 309 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 XAGE5Q8WWM1 108 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 TRNT1Q96Q11 434 aaKnown RBP16.95■□□□□ 0.3
PTCD3-217ENST00000488801 SLC38A1Q9H2H9 487 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 RUBCNLQ9H714 662 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 HHATLQ9HCP6 504 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 TINAGQ9UJW2 476 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 LIPT1Q9Y234 373 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 COL12A1Q99715 3063 aa16.95■□□□□ 0.3
PTCD3-217ENST00000488801 FBP2O00757 339 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 SCDO00767 359 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 NDUFB5O43674 189 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 ZIC3O60481 467 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 SNX3O60493 162 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 TNFRSF21O75509 655 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 UGT2B17O75795 530 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 CHRM4P08173 479 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 ABOP16442 354 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 RPS4Y1P22090 263 aaKnown RBP16.94■□□□□ 0.3
PTCD3-217ENST00000488801 CLK3P49761 638 aaKnown RBP16.94■□□□□ 0.3
PTCD3-217ENST00000488801 ANXA11P50995 505 aaKnown RBP16.94■□□□□ 0.3
PTCD3-217ENST00000488801 GFRA1P56159 465 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 B3GALT5-AS1P59052 145 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 PLAURQ03405 335 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 RGNQ15493 299 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 COQ5Q5HYK3 327 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 ATAD3BQ5T9A4 648 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 C1QL3Q5VWW1 255 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 DOLPP1Q86YN1 238 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 C10orf111Q8N326 155 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 ANKFN1Q8N957 763 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 FAM71CQ8NEG0 241 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 DUSP19Q8WTR2 217 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 CPPED1Q9BRF8 314 aaPredicted RBP16.94■□□□□ 0.3
PTCD3-217ENST00000488801 DSN1Q9H410 356 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 IKZF5Q9H5V7 419 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 SLC5A6Q9Y289 635 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 NDUFAF1Q9Y375 327 aa16.94■□□□□ 0.3
PTCD3-217ENST00000488801 CLIC1O00299 241 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 BCKDKO14874 412 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 H6PDO95479 791 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 LDLRP01130 860 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 SNRPB2P08579 225 aaKnown RBP16.93■□□□□ 0.3
PTCD3-217ENST00000488801 RNF224P0DH78 156 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 ETFAP13804 333 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 ADH7P40394 386 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 DSCR4P56555 118 aaPredicted RBP16.93■□□□□ 0.3
PTCD3-217ENST00000488801 GNGT1P63211 74 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 STX5Q13190 355 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 SYPL1Q16563 259 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 TMEM44Q2T9K0 475 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 WIPI1Q5MNZ9 446 aaPredicted RBP16.93■□□□□ 0.3
PTCD3-217ENST00000488801 DCST1Q5T197 706 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 VASNQ6EMK4 673 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 LRRC74BQ6ZQY2 392 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 DHDDSQ86SQ9 333 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 CD163Q86VB7 1156 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 ZNF619Q8N2I2 560 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 ZNF527Q8NB42 609 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 OR4K17Q8NGC6 315 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 C1GALT1C1Q96EU7 318 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 DTNBP1Q96EV8 351 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 DMRTA2Q96SC8 542 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 KLHDC3Q9BQ90 382 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms