RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SIDT1Q9NXL6 827 aaKnown RBP18.74■□□□□ 0.59
NECAB3-213ENST00000488489 TMCC3Q9ULS5 477 aa18.74■□□□□ 0.59
NECAB3-213ENST00000488489 POFUT2Q9Y2G5 429 aa18.74■□□□□ 0.59
NECAB3-213ENST00000488489 NTNG1Q9Y2I2 539 aa18.74■□□□□ 0.59
NECAB3-213ENST00000488489 GMPPBQ9Y5P6 360 aa18.74■□□□□ 0.59
NECAB3-213ENST00000488489 CACNA1HO95180 2353 aa18.74■□□□□ 0.59
NECAB3-213ENST00000488489 PRKNO60260 465 aaPredicted RBP18.73■□□□□ 0.59
NECAB3-213ENST00000488489 THBS1P07996 1170 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 CCDC159P0C7I6 412 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 GP2P55259 537 aaKnown RBP18.73■□□□□ 0.59
NECAB3-213ENST00000488489 PIGFQ07326 219 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 BIKQ13323 160 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 ZNHIT3Q15649 155 aaPredicted RBP18.73■□□□□ 0.59
NECAB3-213ENST00000488489 NNATQ16517 81 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 PODNL1Q6PEZ8 512 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 BMP8AQ7Z5Y6 402 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 IGFN1Q86VF2 1251 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 PARP8Q8N3A8 854 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 GFM1Q96RP9 751 aaKnown RBP18.73■□□□□ 0.59
NECAB3-213ENST00000488489 PITX2Q99697 317 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 PELOQ9BRX2 385 aaKnown RBP18.73■□□□□ 0.59
NECAB3-213ENST00000488489 PAK1IP1Q9NWT1 392 aaPredicted RBP18.73■□□□□ 0.59
NECAB3-213ENST00000488489 NUP210LQ5VU65 1888 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 PHF19Q5T6S3 580 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 B3GNT8Q7Z7M8 397 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 ZSCAN1Q8NBB4 408 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 CNIH3Q8TBE1 160 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 CLIP3Q96DZ5 547 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 HRASLS5Q96KN8 279 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 ITPAQ9BY32 194 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 TRIM45Q9H8W5 580 aaPredicted RBP18.73■□□□□ 0.59
NECAB3-213ENST00000488489 APMAPQ9HDC9 416 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 OCIAD1Q9NX40 245 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 KLHL28Q9NXS3 571 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 SRPK3Q9UPE1 567 aa18.73■□□□□ 0.59
NECAB3-213ENST00000488489 TCRBV16S1A1N1A0A5B0 115 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 CPSF4LA6NMK7 179 aaKnown RBP18.72■□□□□ 0.59
NECAB3-213ENST00000488489 NTN3O00634 580 aaPredicted RBP18.72■□□□□ 0.59
NECAB3-213ENST00000488489 GDF9O60383 454 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 OR10H3O60404 316 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 DBIP07108 87 aaKnown RBP18.72■□□□□ 0.59
NECAB3-213ENST00000488489 NID1P14543 1247 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 RGS8P57771 180 aaPredicted RBP18.72■□□□□ 0.59
NECAB3-213ENST00000488489 SMIM11AP58511 58 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 IL5RAQ01344 420 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 PLAURQ03405 335 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 CBX3Q13185 183 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 CDK5R2Q13319 367 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 KLHL17Q6TDP4 642 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 NLGN4XQ8N0W4 816 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 DIO2Q92813 273 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 BCL7BQ9BQE9 202 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 VN1R1Q9GZP7 353 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 ZNF556Q9HAH1 456 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 PCDHGB1Q9Y5G3 927 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 PCDHGA6Q9Y5G7 932 aa18.72■□□□□ 0.59
NECAB3-213ENST00000488489 FAAHO00519 579 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 NTN1O95631 604 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 GSSP48637 474 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 ZNF136P52737 540 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 ZNF846Q147U1 533 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 NSDHLQ15738 373 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 FLYWCH1Q4VC44 716 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 MRPL2Q5T653 305 aaKnown RBP18.71■□□□□ 0.59
NECAB3-213ENST00000488489 LAIR1Q6GTX8 287 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 SHISA6Q6ZSJ9 500 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 LSRQ86X29 649 aaPredicted RBP18.71■□□□□ 0.59
NECAB3-213ENST00000488489 MORN4Q8NDC4 146 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 SLC7A5P2Q9GIP4 190 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 MKKSQ9NPJ1 570 aaPredicted RBP18.71■□□□□ 0.59
NECAB3-213ENST00000488489 SEMA4GQ9NTN9 838 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 RARRES3Q9UL19 164 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 MKL2Q9ULH7 1088 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 R4GN57 208 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 ZNF99A8MXY4 864 aaPredicted RBP18.71■□□□□ 0.59
NECAB3-213ENST00000488489 D6RAR5 112 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 KHNYNO15037 678 aaKnown RBP18.71■□□□□ 0.59
NECAB3-213ENST00000488489 ATP6V1G1O75348 118 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 SCRG1O75711 98 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 SOX30O94993 753 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 THY1P04216 161 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 PRG2P13727 222 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 OPRL1P41146 370 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 DUSP3P51452 185 aaPredicted RBP18.71■□□□□ 0.59
NECAB3-213ENST00000488489 SLC37A1P57057 533 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 TAS2R41P59536 307 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 CTF1Q16619 201 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 ENTPD8Q5MY95 495 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 PGBD2Q6P3X8 592 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 POLE3Q9NRF9 147 aa18.71■□□□□ 0.59
NECAB3-213ENST00000488489 LNP1A1A4G5 178 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 CDHR4A6H8M9 788 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 CLDN25C9JDP6 229 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 INMTO95050 263 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 GABARAPO95166 117 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 OXSR1O95747 527 aaPredicted RBP18.7■□□□□ 0.58
NECAB3-213ENST00000488489 CCNYL3P0C7X3 344 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 IDUAP35475 653 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 DBX2Q6ZNG2 339 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 SETD9Q8NE22 299 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms