RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	GSTA1	P08263	222 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	ABHD2	P08910	425 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	MAP3K8	P41279	467 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	ATP5J2	P56134	94 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	RAC1	P63000	192 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	SLC29A2	Q14542	456 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	CTU2	Q2VPK5	515 aa	Known RBP	13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	VPS26B	Q4G0F5	336 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	PDSS1	Q5T2R2	415 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	GTF2IRD2B	Q6EKJ0	949 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	NOXRED1	Q6NXP6	359 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	ZNF551	Q7Z340	670 aa	Predicted RBP	13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	GTF2IRD2	Q86UP8	949 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	STK32C	Q86UX6	486 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	NOA1	Q8NC60	698 aa	Known RBP	13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	OR4C3	Q8NH37	302 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	OR2V1	Q8NHB1	315 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	CEP70	Q8NHQ1	597 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	ACMSD	Q8TDX5	336 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	ACTRT2	Q8TDY3	377 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	SLC9A6	Q92581	669 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	ZBTB8A	Q96BR9	441 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	CCDC126	Q96EE4	140 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	OR10A4	Q9H209	315 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	EQTN	Q9NQ60	294 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	C7orf72	A4D263	438 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452		H3BQF6	201 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	CRCP	O75575	148 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	RSL1D1	O76021	490 aa	Known RBP	13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	OXSR1	O95747	527 aa	Predicted RBP	13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	NGFR	P08138	427 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	PYGB	P11216	843 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	PSMA4	P25789	261 aa	Known RBP	13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	NAA20	P61599	178 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	HSPB3	Q12988	150 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	CAPRIN1	Q14444	709 aa	Known RBP	13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	GLE1	Q53GS7	698 aa	Known RBP	13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	MFSD12	Q6NUT3	480 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	ESPNL	Q6ZVH7	1005 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	GALNT10	Q86SR1	603 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	SPATA3	Q8NHX4	192 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	FAM110B	Q8TC76	370 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	HOXB13	Q92826	284 aa	Predicted RBP	13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	METTL2A	Q96IZ6	378 aa	Known RBP	13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	EGLN2	Q96KS0	407 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	HDHD5	Q9BXW7	423 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	DCDC2	Q9UHG0	476 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452	ADAM21	Q9UKJ8	722 aa		13.56	□□□□□ -0.24
NELFA-215	ENST00000488452		A0A0J9YW62	118 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452		A0A1W2PRB8	838 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	TNFSF11	O14788	317 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	PDPK1	O15530	556 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	SEC22B	O75396	215 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	CRLF1	O75462	422 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	TUBB	P07437	444 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	PSMB1	P20618	241 aa	Known RBP	13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	ME2	P23368	584 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	GPC1	P35052	558 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	PRKAG1	P54619	331 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	SLC18A2	Q05940	514 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	TNK1	Q13470	666 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	KIAA0040	Q15053	153 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	HBM	Q6B0K9	141 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	CXXC5	Q7LFL8	322 aa	Known RBP	13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	CDRT4	Q8N9R6	151 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	NUP43	Q8NFH3	380 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	OR6Y1	Q8NGX8	325 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	OSTF1	Q92882	214 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	RNF145	Q96MT1	663 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	NPAS1	Q99742	590 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	IQCG	Q9H095	443 aa	Known RBP	13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	MED17	Q9NVC6	651 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452	LAMP3	Q9UQV4	416 aa		13.55	□□□□□ -0.24
NELFA-215	ENST00000488452		G3V2L1	256 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	SOX30	O94993	753 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	KCNK2	O95069	426 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	PABPC4L	P0CB38	370 aa	Known RBP	13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	MYL2	P10916	166 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	AGTR1	P30556	359 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	LCN1	P31025	176 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	ZNF41	P51814	821 aa	Predicted RBP	13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	MANF	P55145	182 aa	Known RBP	13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	CARD18	P57730	90 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	RPS4X	P62701	263 aa	Known RBP	13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	PLPPR5	Q32ZL2	321 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	ALKBH2	Q6NS38	261 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	ANKRD26P1	Q6NSI1	321 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	ADAM5	Q6NVV9	412 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	FIGNL1	Q6PIW4	674 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	ZYG11A	Q6WRX3	759 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	TRABD2A	Q86V40	505 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	MISP	Q8IVT2	679 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	LILRA2	Q8N149	483 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	GATS	Q8NAP1	163 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	MNS1	Q8NEH6	495 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	STEAP2	Q8NFT2	490 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	ZFP28	Q8NHY6	868 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms