RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ECSITQ9BQ95 431 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 CPPED1Q9BRF8 314 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-219ENST00000488186 ZNF350Q9GZX5 532 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 PTGES2Q9H7Z7 377 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 DTNAQ9Y4J8 743 aa14.37□□□□□ -0.11
C9orf3-219ENST00000488186 A0A1W2PQD3 144 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 GUSBP08236 651 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 GPX2P18283 190 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 SLC6A2P23975 617 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 MST1P26927 711 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 GCKP35557 465 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 NUDT2P50583 147 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 CHRNEQ04844 493 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 IGFBP7Q16270 282 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 HYAL4Q2M3T9 481 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 PDZK1Q5T2W1 519 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 ZNF324BQ6AW86 544 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-219ENST00000488186 TYW3Q6IPR3 259 aaKnown RBP14.36□□□□□ -0.11
C9orf3-219ENST00000488186 NANOGP8Q6NSW7 305 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 GFRALQ6UXV0 394 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 OLIG3Q7RTU3 272 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 GHDCQ8N2G8 530 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 SLC38A5Q8WUX1 472 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 PMM1Q92871 262 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 GPR137Q96N19 417 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 DSN1Q9H410 356 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 NANOGQ9H9S0 305 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 A4GALTQ9NPC4 353 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 QPCTLQ9NXS2 382 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 MED11Q9P086 117 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 DKKL1Q9UK85 242 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 C15orf41Q9Y2V0 281 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 L3MBTL1Q9Y468 752 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 NINQ8N4C6 2090 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 ZGRF1Q86YA3 2104 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 EML6Q6ZMW3 1958 aa14.36□□□□□ -0.11
C9orf3-219ENST00000488186 A0A0G2JPF8 293 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 LRRC3CA6NJW4 275 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 HNRNPCL2B2RXH8 293 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 HNRNPCL3B7ZW38 293 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 FAM47E-STBD1D6RA91 191 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 GMFGO60234 142 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 KIAA0513O60268 411 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 HNRNPCL1O60812 293 aaKnown RBP14.35□□□□□ -0.11
C9orf3-219ENST00000488186 CYP7B1O75881 506 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 CHRM4P08173 479 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 NUDT7P0C024 238 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 TFPTP0C1Z6 253 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 RFPL3SP0C7P2 107 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 HNRNPCL4P0DMR1 293 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 IL7RP16871 459 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 MSX1P28360 303 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 RNF144AP50876 292 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-219ENST00000488186 MNAT1P51948 309 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 GAS1P54826 345 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 MXRA7P84157 204 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 FUT5Q11128 374 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 KLHL26Q53HC5 615 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 APOOLQ6UXV4 268 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 FRRS1Q6ZNA5 592 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 EIF3MQ7L2H7 374 aaKnown RBP14.35□□□□□ -0.11
C9orf3-219ENST00000488186 PEX5LQ8IYB4 626 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 METTL25Q8N6Q8 603 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 WDSUB1Q8N9V3 476 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 ST6GALNAC3Q8NDV1 305 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 OR8J3Q8NGG0 315 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 OR10A6Q8NH74 314 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 RNF138Q8WVD3 245 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 MAL2Q969L2 176 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 TMEM19Q96HH6 336 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 SH3YL1Q96HL8 342 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-219ENST00000488186 HOPXQ9BPY8 73 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-219ENST00000488186 SLX1AQ9BQ83 275 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 SLC39A3Q9BRY0 314 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 TRIM8Q9BZR9 551 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 SAP130Q9H0E3 1048 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-219ENST00000488186 TAGLN3Q9UI15 199 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 ZNF232Q9UNY5 417 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 AP3M1Q9Y2T2 418 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 GMEB1Q9Y692 573 aa14.35□□□□□ -0.11
C9orf3-219ENST00000488186 EXPH5Q8NEV8 1989 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 C15orf38-AP3S2A0A0A6YYH1 394 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 PRAMEF27A3QJZ7 478 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ANKUB1A6NFN9 424 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 SERINC4A6NH21 518 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 HCRTR2O43614 444 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 TNFRSF21O75509 655 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 UGT2B17O75795 530 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 WISP1O95388 367 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 NUDT14O95848 222 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 DBIP07108 87 aaKnown RBP14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ESRRAP11474 423 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-219ENST00000488186 BMP2P12643 396 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 CDK6Q00534 326 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 SCARB2Q14108 478 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 SELPLGQ14242 412 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ZNF141Q15928 474 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ZNF630Q2M218 657 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-219ENST00000488186 CMPK2Q5EBM0 449 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms