RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 C4orf33Q8N1A6 199 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 CDRT4Q8N9R6 151 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 GATSQ8NAP1 163 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 SLC16A11Q8NCK7 471 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 CLHC1Q8NHS4 586 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 FBXO30Q8TB52 745 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
VPS16-208ENST00000487461 UBLCP1Q8WVY7 318 aaPredicted RBP10.95□□□□□ -0.66
VPS16-208ENST00000487461 SLC9A6Q92581 669 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 PPCDCQ96CD2 204 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 PIK3IP1Q96FE7 263 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 C16orf58Q96GQ5 468 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 ZC3HAV1LQ96H79 300 aaKnown RBP10.95□□□□□ -0.66
VPS16-208ENST00000487461 C18orf12Q96KH6 178 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 MARK4Q96L34 752 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 TSSK3Q96PN8 268 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 CCT7Q99832 543 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 KLHDC3Q9BQ90 382 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 PLSCR4Q9NRQ2 329 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 PROCRQ9UNN8 238 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 DNAJC15Q9Y5T4 150 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 EIF1AYO14602 144 aaKnown RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 LSM1O15116 133 aaKnown RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 NDUFB5O43674 189 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 TRIM13O60858 407 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 OXSR1O95747 527 aaPredicted RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 NGFRP08138 427 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 INHBBP09529 407 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 BCKDHAP12694 445 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 EFNA1P20827 205 aaPredicted RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 PSMA4P25789 261 aaKnown RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 LOXP28300 417 aaPredicted RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 EIF1AXP47813 144 aaKnown RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 LTBQ06643 244 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 PDE7AQ13946 482 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 FGFBP1Q14512 234 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 PCLAFQ15004 111 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 ACKR1Q16570 336 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 DUSP5Q16690 384 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 EXOC3L2Q2M3D2 409 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 CTU2Q2VPK5 515 aaKnown RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 UGT3A2Q3SY77 523 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 VPS26BQ4G0F5 336 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 EXOSC6Q5RKV6 272 aaKnown RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 KANK2Q63ZY3 851 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 RNF165Q6ZSG1 346 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 GTPBP8Q8N3Z3 284 aaPredicted RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 EIF1ADQ8N9N8 165 aaKnown RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 ZFP28Q8NHY6 868 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 ZBED6CLQ96FA7 236 aaPredicted RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 OTUB1Q96FW1 271 aaPredicted RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 ADGRG7Q96K78 797 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 PIP5K1AQ99755 562 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 PRRG4Q9BZD6 226 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 KLHL4Q9C0H6 718 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 ACSS1Q9NUB1 689 aaPredicted RBP10.94□□□□□ -0.66
VPS16-208ENST00000487461 CLEC4AQ9UMR7 237 aa10.94□□□□□ -0.66
VPS16-208ENST00000487461 ROS1P08922 2347 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 A0A087WZY1 265 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 A0A1W2PRB8 838 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 ARHGEF9O43307 516 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 CXCL13O43927 109 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 SMPD2O60906 423 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 THBDP07204 575 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 CHRNGP07510 517 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 FGF4P08620 206 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 ALOX5P09917 674 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 NEFHP12036 1026 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 FCGR2AP12318 317 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 ZNF17P17021 662 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 IL11P20809 199 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 RPL38P63173 70 aaKnown RBP10.93□□□□□ -0.66
VPS16-208ENST00000487461 GALNTL6Q49A17 601 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 CCNJQ5T5M9 372 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 CPTPQ5TA50 214 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 PPP4R4Q6NUP7 873 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 MFSD12Q6NUT3 480 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 SZRD1Q7Z422 152 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 P3H2Q8IVL5 708 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 WDR75Q8IWA0 830 aaKnown RBP10.93□□□□□ -0.66
VPS16-208ENST00000487461 LRRC75A-AS1Q8N1F1 130 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 OR6Y1Q8NGX8 325 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 OR10D3Q8NH80 312 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 POC1BQ8TC44 478 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 ACTRT2Q8TDY3 377 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 PIGTQ969N2 578 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 MS4A4EQ96PG1 132 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 TRMOQ9BU70 441 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 IQCGQ9H095 443 aaKnown RBP10.93□□□□□ -0.66
VPS16-208ENST00000487461 PPCSQ9HAB8 311 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 UBTD1Q9HAC8 227 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 UBQLN4Q9NRR5 601 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 MED17Q9NVC6 651 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 STOML1Q9UBI4 398 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 TMED5Q9Y3A6 229 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 TRAF6Q9Y4K3 522 aa10.93□□□□□ -0.66
VPS16-208ENST00000487461 A0A0J9YW62 118 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 C7orf72A4D263 438 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 TMEM233B4DJY2 109 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms