RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 FRG2BQ96QU4 278 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 GPR22Q99680 433 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 CPNE1Q99829 537 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 MCMBPQ9BTE3 642 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 TRMOQ9BU70 441 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 MRPL1Q9BYD6 325 aaKnown RBP6.78□□□□□ -1.32
PDPN-205ENST00000487038 C3orf14Q9HBI5 128 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 Q9N2J8 555 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 NMRK1Q9NWW6 199 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 NFU1Q9UMS0 254 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 MTO1Q9Y2Z2 717 aaKnown RBP6.78□□□□□ -1.32
PDPN-205ENST00000487038 ACOT9Q9Y305 439 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 RNF11Q9Y3C5 154 aa6.78□□□□□ -1.32
PDPN-205ENST00000487038 TNPO3Q9Y5L0 923 aaKnown RBP6.78□□□□□ -1.32
PDPN-205ENST00000487038 IGLV3-32A0A0A0MS00 114 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 A0A0G2JK05 382 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 GOLGA8QA0A0J9YX86 632 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 CCDC189A1A4V9 331 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 C7orf72A4D263 438 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 GOLGA8OA6NCC3 632 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 GJE1A6NN92 205 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 VWC2LB2RUY7 222 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 GOLGA8NF8WBI6 632 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 GOLGA8RI6L899 631 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 LYZL6O75951 148 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 PRKD3O94806 890 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 IL33O95760 270 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 EGR1P18146 543 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 GP5P40197 560 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 NR4A2P43354 598 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 RFX3P48380 749 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 COMPP49747 757 aaPredicted RBP6.77□□□□□ -1.33
PDPN-205ENST00000487038 CCNG1P51959 295 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 ALDH18A1P54886 795 aaKnown RBP6.77□□□□□ -1.33
PDPN-205ENST00000487038 CARD18P57730 90 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 PSG6Q00889 435 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 DUSP2Q05923 314 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 PDIA2Q13087 525 aaKnown RBP6.77□□□□□ -1.33
PDPN-205ENST00000487038 TMEM44Q2T9K0 475 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 IQCCQ4KMZ1 466 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 PDLIM3Q53GG5 364 aaPredicted RBP6.77□□□□□ -1.33
PDPN-205ENST00000487038 FAM180BQ6P0A1 224 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 UGT2A3Q6UWM9 527 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 ZNF662Q6ZS27 426 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 Q6ZSR9 355 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 Q6ZT83 130 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 COMMD6Q7Z4G1 85 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 GOLGA7Q7Z5G4 137 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 TUSC5Q8IXB3 177 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 CCDC116Q8IYX3 515 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 FAM9CQ8IZT9 166 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 GTPBP8Q8N3Z3 284 aaPredicted RBP6.77□□□□□ -1.33
PDPN-205ENST00000487038 CDYL2Q8N8U2 506 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 OR4N2Q8NGD1 307 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 OR9A2Q8NGT5 310 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 RHEBL1Q8TAI7 183 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 ABHD3Q8WU67 409 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 MS4A14Q96JA4 679 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 KLHL15Q96M94 604 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 ZNF681Q96N22 645 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 HBEGFQ99075 208 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 PRR14Q9BWN1 585 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 SHCBP1LQ9BZQ2 653 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 BHLHE41Q9C0J9 482 aaPredicted RBP6.77□□□□□ -1.33
PDPN-205ENST00000487038 ELOVL6Q9H5J4 265 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 OCEL1Q9H607 264 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 ANKRA2Q9H9E1 313 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 KLHL9Q9P2J3 617 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 METRNQ9UJH8 293 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 SLC12A4Q9UP95 1085 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.77□□□□□ -1.33
PDPN-205ENST00000487038 VWFP04275 2813 aa6.77□□□□□ -1.33
PDPN-205ENST00000487038 HEATR1Q9H583 2144 aaKnown RBP6.76□□□□□ -1.33
PDPN-205ENST00000487038 LOC390937A0A1W2PQ73 354 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 E7EQL1 145 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 PLOD3O60568 738 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 SLITRK5O94991 958 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 KCNH1O95259 989 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 YES1P07947 543 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 ZNF23P17027 643 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 ELK4P28324 431 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 CRABP2P29373 138 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 MPIP34949 423 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 SPRP35270 261 aaPredicted RBP6.76□□□□□ -1.33
PDPN-205ENST00000487038 PRR5P85299 388 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 CSTF3Q12996 717 aaKnown RBP6.76□□□□□ -1.33
PDPN-205ENST00000487038 HEPACAMQ14CZ8 416 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 CARTPTQ16568 116 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 PFKFB4Q16877 469 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 FAM83EQ2M2I3 478 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 ARL13AQ5H913 290 aaPredicted RBP6.76□□□□□ -1.33
PDPN-205ENST00000487038 KLC3Q6P597 504 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 FCRLAQ7L513 359 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 NUFIP2Q7Z417 695 aaKnown RBP6.76□□□□□ -1.33
PDPN-205ENST00000487038 CCDC91Q7Z6B0 441 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 MARCH3Q86UD3 253 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 TRABD2AQ86V40 505 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 ZBED8Q8IZ13 594 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms