RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 PBX2P40425 430 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 FXYD6P3P58550 94 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 INSL4Q14641 139 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF791Q3KP31 576 aaPredicted RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 PRRT3Q5FWE3 981 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 EXOSC6Q5RKV6 272 aaKnown RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 VASNQ6EMK4 673 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 ANKRD54Q6NXT1 300 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 TMEM53Q6P2H8 277 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 WDR88Q6ZMY6 472 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 TMEFF1Q8IYR6 380 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 OR4N4Q8N0Y3 316 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 Q8N9G6 341 aaPredicted RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 SPRYD4Q8WW59 207 aaPredicted RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 ASB12Q8WXK4 309 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 BMFQ96LC9 184 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 RIPOR3Q96MK2 946 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 TMED9Q9BVK6 235 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 MMP28Q9H239 520 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 PIGUQ9H490 435 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 TBC1D17Q9HA65 648 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 MOV10Q9HCE1 1003 aaKnown RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 CD93Q9NPY3 652 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 KCNE5Q9UJ90 142 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 PILRAQ9UKJ1 303 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 C19orf53Q9UNZ5 99 aaPredicted RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 FAM183AA6NL82 134 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 CASKO14936 926 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 AKAP8O43823 692 aaKnown RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 THBS1P07996 1170 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 GAAP10253 952 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 HOXB2P14652 356 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 FUT1P19526 365 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 RPS4Y1P22090 263 aaKnown RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 SSTR4P31391 388 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 GCGRP47871 477 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 SF3B4Q15427 424 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 PDZK1Q5T2W1 519 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 SDE2Q6IQ49 451 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 FIGLAQ6QHK4 219 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 B3GLCTQ6Y288 498 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 SIRT6Q8N6T7 355 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 OR52N1Q8NH53 320 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 KIAA1143Q96AT1 154 aaPredicted RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 JAM3Q9BX67 310 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 ENKD1Q9H0I2 346 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 C11orf54Q9H0W9 315 aaPredicted RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 FBXO34Q9NWN3 711 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 COMMD3Q9UBI1 195 aa11.47□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF223Q9UK11 482 aaPredicted RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 MRPS2Q9Y399 296 aaKnown RBP11.47□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF860A6NHJ4 632 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 GABRPO00591 440 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 HLA-DPB1P04440 258 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 GKN3PP0CG01 181 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 POLR2CP19387 275 aaPredicted RBP11.46□□□□□ -0.57
PTCD2-204ENST00000486995 DAB2P98082 770 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 MADCAM1Q13477 382 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.46□□□□□ -0.57
PTCD2-204ENST00000486995 EIPR1Q53HC9 387 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 PYDC2Q56P42 97 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 EOGTQ5NDL2 527 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 ATAD3CQ5T2N8 411 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF322Q6U7Q0 402 aaPredicted RBP11.46□□□□□ -0.57
PTCD2-204ENST00000486995 CXXC5Q7LFL8 322 aaKnown RBP11.46□□□□□ -0.57
PTCD2-204ENST00000486995 BRIX1Q8TDN6 353 aaKnown RBP11.46□□□□□ -0.57
PTCD2-204ENST00000486995 WDR92Q96MX6 357 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 COQ7Q99807 217 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 ATF6BQ99941 703 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 SOSTQ9BQB4 213 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 PBX4Q9BYU1 374 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 DPH1Q9BZG8 443 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 SLC22A4Q9H015 551 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 OR52D1Q9H346 318 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 CACYBPQ9HB71 228 aaKnown RBP11.46□□□□□ -0.57
PTCD2-204ENST00000486995 ADAP2Q9NPF8 381 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 C20orf141Q9NUB4 165 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 H2AFY2Q9P0M6 372 aaPredicted RBP11.46□□□□□ -0.57
PTCD2-204ENST00000486995 TNFRSF10DQ9UBN6 386 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF221Q9UK13 617 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 N6AMT1Q9Y5N5 214 aa11.46□□□□□ -0.57
PTCD2-204ENST00000486995 MEIOCA2RUB1 952 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 TRAPPC13A5PLN9 417 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 URADA6NGE7 173 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 EPOPA6NHQ4 379 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 UNC119BA6NIH7 251 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 PLA2G10O15496 165 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 CHST10O43529 356 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 LDB3O75112 727 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 LYPD3O95274 346 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 KRT8P05787 483 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 MAKP20794 623 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 ATP6V1E1P36543 226 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.58
PTCD2-204ENST00000486995 DCST2Q5T1A1 773 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 SLC35F1Q5T1Q4 408 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 PRSS41Q7RTY9 318 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 RANBP3LQ86VV4 465 aaPredicted RBP11.46□□□□□ -0.58
PTCD2-204ENST00000486995 MARCH9Q86YJ5 346 aa11.46□□□□□ -0.58
PTCD2-204ENST00000486995 ZNF619Q8N2I2 560 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms