RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 GIFP27352 417 aa13.29□□□□□ -0.28
U2AF1-211ENST00000486519 APOBEC3AP31941 199 aaPredicted RBP13.29□□□□□ -0.28
U2AF1-211ENST00000486519 SFTPDP35247 375 aa13.29□□□□□ -0.28
U2AF1-211ENST00000486519 KRT20P35900 424 aa13.29□□□□□ -0.28
U2AF1-211ENST00000486519 OR3A2P47893 321 aa13.29□□□□□ -0.28
U2AF1-211ENST00000486519 FOXG1P55316 489 aaPredicted RBP13.29□□□□□ -0.28
U2AF1-211ENST00000486519 POU4F1Q01851 419 aa13.29□□□□□ -0.28
U2AF1-211ENST00000486519 HP1BP3Q5SSJ5 553 aaPredicted RBP13.29□□□□□ -0.28
U2AF1-211ENST00000486519 LRRC70Q7Z2Q7 622 aa13.29□□□□□ -0.28
U2AF1-211ENST00000486519 ZC3HC1Q86WB0 502 aaKnown RBP13.29□□□□□ -0.28
U2AF1-211ENST00000486519 MYLK4Q86YV6 388 aaPredicted RBP13.29□□□□□ -0.28
U2AF1-211ENST00000486519 ZNF433Q8N7K0 673 aaPredicted RBP13.29□□□□□ -0.28
U2AF1-211ENST00000486519 CENPKQ9BS16 269 aa13.29□□□□□ -0.28
U2AF1-211ENST00000486519 PAQR5Q9NXK6 330 aaPredicted RBP13.29□□□□□ -0.28
U2AF1-211ENST00000486519 PCDHA9Q9Y5H5 950 aa13.29□□□□□ -0.28
U2AF1-211ENST00000486519 LYNX1G3V0Z9 82 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 NDUFB5O43674 189 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 EFNA2O43921 213 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 LYNX1P0DP58 116 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 PGCP20142 388 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 ENPP1P22413 925 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 ARFIP1P53367 373 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 RAC1P63000 192 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 PHC1P78364 1004 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 SLC25A3Q00325 362 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 PSG6Q00889 435 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 SRSF4Q08170 494 aaKnown RBP13.28□□□□□ -0.28
U2AF1-211ENST00000486519 FOXL1Q12952 345 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 CSTF3Q12996 717 aaKnown RBP13.28□□□□□ -0.28
U2AF1-211ENST00000486519 SPANXN3Q5MJ09 141 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 SH2D4BQ5SQS7 431 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 ESPNLQ6ZVH7 1005 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 ZCCHC24Q8N2G6 241 aaKnown RBP13.28□□□□□ -0.28
U2AF1-211ENST00000486519 GTPBP8Q8N3Z3 284 aaPredicted RBP13.28□□□□□ -0.28
U2AF1-211ENST00000486519 FAM110BQ8TC76 370 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 ZNF300Q96RE9 604 aaPredicted RBP13.28□□□□□ -0.28
U2AF1-211ENST00000486519 USB1Q9BQ65 265 aaKnown RBP13.28□□□□□ -0.28
U2AF1-211ENST00000486519 DERL2Q9GZP9 239 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 CAB39LQ9H9S4 337 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 MYNNQ9NPC7 610 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 HIF1ANQ9NWT6 349 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 PPIAL4AQ9Y536 164 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 PTGDR2Q9Y5Y4 395 aa13.28□□□□□ -0.28
U2AF1-211ENST00000486519 IGLV3-32A0A0A0MS00 114 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 PIAS1O75925 651 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 IGHV3-9P01782 118 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 FGGP02679 453 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 YES1P07947 543 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 CD1DP15813 335 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 CSNK2A2P19784 350 aaPredicted RBP13.27□□□□□ -0.29
U2AF1-211ENST00000486519 CARD18P57730 90 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 CUL3Q13618 768 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 MORF4L2Q15014 288 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 FBLN7Q53RD9 439 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 TBC1D1Q86TI0 1168 aaPredicted RBP13.27□□□□□ -0.29
U2AF1-211ENST00000486519 GLCCI1Q86VQ1 547 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 TXLNBQ8N3L3 684 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 OR9A2Q8NGT5 310 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 ZBTB8AQ96BR9 441 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 KLHL29Q96CT2 875 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 KLHL15Q96M94 604 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 DUX5Q96PT3 197 aa13.27□□□□□ -0.29
U2AF1-211ENST00000486519 MRPL1Q9BYD6 325 aaKnown RBP13.27□□□□□ -0.29
U2AF1-211ENST00000486519 CDC42EP4Q9H3Q1 356 aaKnown RBP13.27□□□□□ -0.29
U2AF1-211ENST00000486519 PHGDHO43175 533 aaKnown RBP13.26□□□□□ -0.29
U2AF1-211ENST00000486519 TTC4O95801 387 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 ANGPTL1O95841 491 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 BMP4P12644 408 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 MLC1Q15049 377 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 RNPS1Q15287 305 aaKnown RBP13.26□□□□□ -0.29
U2AF1-211ENST00000486519 CPSF6Q16630 551 aaKnown RBP eCLIP13.26□□□□□ -0.29
U2AF1-211ENST00000486519 PLPPR5Q32ZL2 321 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 GTF2IRD2BQ6EKJ0 949 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 SHQ1Q6PI26 577 aaKnown RBP13.26□□□□□ -0.29
U2AF1-211ENST00000486519 FCRLAQ7L513 359 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 SLC46A3Q7Z3Q1 461 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 GTF2IRD2Q86UP8 949 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 CARM1Q86X55 608 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 CCDC116Q8IYX3 515 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 ZNF540Q8NDQ6 660 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 WDR20Q8TBZ3 569 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 ZNF75CPQ92670 426 aaPredicted RBP13.26□□□□□ -0.29
U2AF1-211ENST00000486519 TMEM186Q96B77 213 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 CFAP36Q96G28 342 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 PSD2Q9BQI7 771 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 DESI2Q9BSY9 194 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 COQ10BQ9H8M1 238 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 MYOZ1Q9NP98 299 aaPredicted RBP13.26□□□□□ -0.29
U2AF1-211ENST00000486519 SDHAF3Q9NRP4 125 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 MED29Q9NX70 200 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 ABCG2Q9UNQ0 655 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 TSC22D4Q9Y3Q8 395 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 OR10H1Q9Y4A9 318 aa13.26□□□□□ -0.29
U2AF1-211ENST00000486519 A0A1W2PRB8 838 aa13.25□□□□□ -0.29
U2AF1-211ENST00000486519 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
U2AF1-211ENST00000486519 WNT9BO14905 357 aa13.25□□□□□ -0.29
U2AF1-211ENST00000486519 DAOP14920 347 aa13.25□□□□□ -0.29
U2AF1-211ENST00000486519 RFX3P48380 749 aa13.25□□□□□ -0.29
U2AF1-211ENST00000486519 MANFP55145 182 aaKnown RBP13.25□□□□□ -0.29
U2AF1-211ENST00000486519 RIN1Q13671 783 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms