RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ZNF17P17021 662 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 ZNF37AP17032 561 aaPredicted RBP7.2□□□□□ -1.26
XRN1-212ENST00000486211 GGT1P19440 569 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 IGHV1-2P23083 117 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 PSMA4P25789 261 aaKnown RBP7.2□□□□□ -1.26
XRN1-212ENST00000486211 PIK3R1P27986 724 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 GCH1P30793 250 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 EVI2BP34910 448 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 BSGP35613 385 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 GGT5P36269 586 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 XKP51811 444 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 CORO7P57737 925 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 PHC1P78364 1004 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 LAPTM5Q13571 262 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 RIN1Q13671 783 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 TBCCQ15814 346 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 ZNF239Q16600 458 aaKnown RBP7.2□□□□□ -1.26
XRN1-212ENST00000486211 CT45A2Q5DJT8 189 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 FBXO48Q5FWF7 155 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 TMEM201Q5SNT2 666 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 LGSNQ5TDP6 509 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 UGT2A3Q6UWM9 527 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 NPSR1Q6W5P4 371 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 LARP4Q71RC2 724 aaKnown RBP eCLIP7.2□□□□□ -1.26
XRN1-212ENST00000486211 OR7G3Q8NG95 312 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 OR52R1Q8NGF1 315 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 OR2V1Q8NHB1 315 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 ESAMQ96AP7 390 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 FBXO17Q96EF6 278 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 NAP1L3Q99457 506 aaPredicted RBP7.2□□□□□ -1.26
XRN1-212ENST00000486211 C1QTNF5Q9BXJ0 243 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 MMP27Q9H306 513 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 DDX31Q9H8H2 851 aaKnown RBP7.2□□□□□ -1.26
XRN1-212ENST00000486211 SAYSD1Q9NPB0 183 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 MYNNQ9NPC7 610 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 FLRT3Q9NZU0 649 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 PDP1Q9P0J1 537 aaPredicted RBP7.2□□□□□ -1.26
XRN1-212ENST00000486211 SLC17A6Q9P2U8 582 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 BCAP29Q9UHQ4 241 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 ATP23Q9Y6H3 246 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 BIRC6Q9NR09 4857 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 IGLV3-32A0A0A0MS00 114 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 GOLGA6L10A0A0M3HER8 536 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 MAGEB16A2A368 324 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 NME6O75414 186 aaPredicted RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 SNUPNO95149 360 aaKnown RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 ATP1B1P05026 303 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 NUDT17P0C025 328 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 PCNAP12004 261 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 PORP16435 677 aaPredicted RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 MAGEA6P43360 314 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 OR3A2P47893 321 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 RAP1GDS1P52306 607 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 ARFIP1P53367 373 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 PNLIPRP2P54317 469 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 IL13RA1P78552 427 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 IRF8Q02556 426 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 DUSP2Q05923 314 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 STX5Q13190 355 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 CHIT1Q13231 466 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 ACAP2Q15057 778 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 RNPS1Q15287 305 aaKnown RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 TSNQ15631 228 aaKnown RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 PDK4Q16654 411 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 HIST2H2ACQ16777 129 aaPredicted RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 TRMT12Q53H54 448 aaKnown RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 PAGE2BQ5JRK9 111 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 C6orf163Q5TEZ5 329 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 ANKRD22Q5VYY1 191 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 HBMQ6B0K9 141 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 GTF2IRD2BQ6EKJ0 949 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 HIST2H2AA3Q6FI13 130 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 C4orf22Q6V702 233 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 ESPNLQ6ZVH7 1005 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 GTF2IRD2Q86UP8 949 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 WDR75Q8IWA0 830 aaKnown RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 SPATA6LQ8N4H0 392 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 OR4K14Q8NGD5 310 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 FAM110BQ8TC76 370 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 OSTF1Q92882 214 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 ZBTB8AQ96BR9 441 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 EFHD2Q96C19 240 aaPredicted RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 VRK1Q99986 396 aaPredicted RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 BRINP2Q9C0B6 783 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 PTGES2Q9H7Z7 377 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 WDR41Q9HAD4 459 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 GP6Q9HCN6 339 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 DDX28Q9NUL7 540 aaKnown RBP7.19□□□□□ -1.26
XRN1-212ENST00000486211 EGFL7Q9UHF1 273 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 VWA7Q9Y334 891 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 GRIP1Q9Y3R0 1128 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 PPIAL4AQ9Y536 164 aa7.19□□□□□ -1.26
XRN1-212ENST00000486211 LOC100653049A0A140TA62 436 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 A0A1W2PR80 420 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 NCF1BA6NI72 391 aaPredicted RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 NCF1CA8MVU1 366 aaPredicted RBP7.18□□□□□ -1.26
XRN1-212ENST00000486211 ATP6V1G2-DDX39BF2Z307 99 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 M0R1B8 84 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 ICMTO60725 284 aa7.18□□□□□ -1.26
XRN1-212ENST00000486211 KRT34O76011 436 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms