RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 DGAT2L6Q6ZPD8 337 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 EIF3MQ7L2H7 374 aaKnown RBP8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 GDF7Q7Z4P5 450 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 AMIGO2Q86SJ2 522 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 CCDC71Q8IV32 467 aaPredicted RBP8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 OR4N5Q8IXE1 308 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 ZZZ3Q8IYH5 903 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 LGI4Q8N135 537 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 CYP4Z2PQ8N1L4 340 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 ARMC10Q8N2F6 343 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 UCN3Q969E3 161 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 MOAP1Q96BY2 351 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 SLC47A1Q96FL8 570 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 PYURFQ96I23 114 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 MAPKAP1Q9BPZ7 522 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 SLC35A5Q9BS91 424 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 PIF1Q9H611 641 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 COQ10BQ9H8M1 238 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 CHST11Q9NPF2 352 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 PRDM7Q9NQW5 492 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 ADPRHL2Q9NX46 363 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 SCOCQ9UIL1 159 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 PSME2Q9UL46 239 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 OTOGQ6ZRI0 2925 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 HCFC1P51610 2035 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 NCKAP5O14513 1909 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 PKDREJQ9NTG1 2253 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 CACNA1CQ13936 2221 aa8.64□□□□□ -1.03
TMEM39A-208ENST00000486159 ADGRG4Q8IZF6 3080 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 RNF103-CHMP3A0A140T963 221 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 HRKO00198 91 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 TFECO14948 347 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 TNFRSF21O75509 655 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 PRKRAO75569 313 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 C6orf47O95873 294 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 SERPINA1P01009 418 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 CELA3AP09093 270 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 ATP5A1P25705 553 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 NTSP30990 170 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 PTGS2P35354 604 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 PTGER4P35408 488 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 CHI3L1P36222 383 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 SOX3P41225 446 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 MAGEA2P43356 314 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 MANFP55145 182 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 SLC13A2Q13183 592 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 SNTB1Q13884 538 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 GK3PQ14409 553 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF385BQ569K4 471 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 ANKRD26P1Q6NSI1 321 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 NIPAL1Q6NVV3 410 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 MTFR2Q6P444 385 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 TMEM64Q6YI46 380 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 CBLL1Q75N03 491 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 CCDC80Q76M96 950 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 PIWIL3Q7Z3Z3 882 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 PTOV1Q86YD1 416 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 TMEM156Q8N614 296 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 HORMAD2Q8N7B1 307 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 ACOT4Q8N9L9 421 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 FAM98AQ8NCA5 519 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 OR5M9Q8NGP3 310 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 C16orf52Q8NHV5 167 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 FAM57AQ8TBR7 257 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 PTPMT1Q8WUK0 201 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 NEURL3Q96EH8 262 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 AURKBQ96GD4 344 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 SEPHS2Q99611 448 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 CIB1Q99828 191 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 SEMA6AQ9H2E6 1030 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 GIMAP4Q9NUV9 329 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 MS4A12Q9NXJ0 267 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 PHF11Q9UIL8 331 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 BAG5Q9UL15 447 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 FAF1Q9UNN5 650 aaPredicted RBP8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 USP22Q9UPT9 525 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 AP4B1Q9Y6B7 739 aa8.63□□□□□ -1.03
TMEM39A-208ENST00000486159 FAM90A27PA6NNH2 459 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 NPIPA2E9PIF3 369 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 E9PLN8 166 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 NPIPA3F8WFD2 350 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 H0YAE9 185 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 PRRG2O14669 202 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 TMPRSS11DO60235 418 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 PRKD3O94806 890 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 GBAP04062 536 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 IFNA16P05015 189 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 IFI6P09912 130 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 AGAP20933 346 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 DNASE1L1P49184 302 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 PRIM2P49643 509 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 CHN2P52757 468 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 NUP107P57740 925 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 TLE4Q04727 773 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 GAB1Q13480 694 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 PDK3Q15120 406 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ADRM1Q16186 407 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 MPEG1Q2M385 716 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 RFX4Q33E94 735 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms