RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TCF7L2Q9NQB0 619 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 SDHAF3Q9NRP4 125 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 SIRT3Q9NTG7 399 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 KLRF1Q9NZS2 232 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 FAF1Q9UNN5 650 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 MRPS18CQ9Y3D5 142 aaKnown RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 DNAJC13O75165 2243 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 C15orf38-AP3S2A0A0A6YYH1 394 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 GOLGA8QA0A0J9YX86 632 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 GOLGA8OA6NCC3 632 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 PRAMEF25A6NGN4 478 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 TUBAL3A6NHL2 446 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 GOLGA8NF8WBI6 632 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 SNPHO15079 494 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 CFLARO15519 480 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 SCN2BO60939 215 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 ICOSLGO75144 302 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 SLC22A3O75751 556 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 CBR3O75828 277 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 ATE1O95260 518 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 C6orf47O95873 294 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 HMGN2P05204 90 aaKnown RBP9.09□□□□□ -0.95
CPSF4-213ENST00000484112 HPNP05981 417 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 PGRP06401 933 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 INHBBP09529 407 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 UQCRC2P22695 453 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 GABRA3P34903 492 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 MASP1P48740 699 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 ASCL1P50553 236 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 AGFG1P52594 562 aaKnown RBP9.09□□□□□ -0.95
CPSF4-213ENST00000484112 PRKAG1P54619 331 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 STX1BP61266 288 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 HBA1P69905 142 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 FAM174BQ3ZCQ3 159 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 SPDYE7PQ495Y7 208 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 TIGD3Q6B0B8 471 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 NXNQ6DKJ4 435 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 OR4F3Q6IEY1 312 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 CLEC9AQ6UXN8 241 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 MAVSQ7Z434 540 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 MISPQ8IVT2 679 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 ULK2Q8IYT8 1036 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 PRR22Q8IZ63 422 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 MIER2Q8N344 545 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 NAXEQ8NCW5 288 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 OR1J4Q8NGS1 313 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 LINC01560Q8TB33 94 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 FAM110BQ8TC76 370 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 MIPOL1Q8TD10 442 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 GPR151Q8TDV0 419 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 NODALQ96S42 347 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 BTBD2Q9BX70 525 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 HOXD1Q9GZZ0 328 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 UBQLN3Q9H347 655 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 RABEP2Q9H5N1 569 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 CXorf36Q9H7Y0 433 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 SLCO1B3Q9NPD5 702 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 GPATCH2Q9NW75 528 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 C15orf41Q9Y2V0 281 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 WIF1Q9Y5W5 379 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 SNX8Q9Y5X2 465 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 EXPH5Q8NEV8 1989 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 AKAP6Q13023 2319 aa9.09□□□□□ -0.95
CPSF4-213ENST00000484112 ZNF469Q96JG9 3925 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-213ENST00000484112 LRRC3CA6NJW4 275 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 KDM4EB2RXH2 506 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-213ENST00000484112 FADS1O60427 444 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 EDF1O60869 148 aaKnown RBP9.08□□□□□ -0.96
CPSF4-213ENST00000484112 EVI2BP34910 448 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 GCKP35557 465 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 PTGDSP41222 190 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 IDH3AP50213 366 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 ANXA11P50995 505 aaKnown RBP9.08□□□□□ -0.96
CPSF4-213ENST00000484112 ATP4BP51164 291 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 AQP5P55064 265 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 UFM1P61960 85 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 POU6F2P78424 691 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-213ENST00000484112 GANABQ14697 944 aaKnown RBP9.08□□□□□ -0.96
CPSF4-213ENST00000484112 DAZAP2Q15038 168 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-213ENST00000484112 POU4F3Q15319 338 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 SF3B4Q15427 424 aaKnown RBP eCLIP9.08□□□□□ -0.962e-11■■■■■ 43.2
CPSF4-213ENST00000484112 NHSL2Q5HYW2 709 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 SPANXN4Q5MJ08 99 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 METTL21CQ5VZV1 264 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 AP1ARQ63HQ0 302 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 SZRD1Q7Z422 152 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 PLCZ1Q86YW0 608 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 COX18Q8N8Q8 333 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 SLC16A11Q8NCK7 471 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 OR4N2Q8NGD1 307 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 OR4A15Q8NGL6 344 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 NEIL3Q8TAT5 605 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 ADAMTS15Q8TE58 950 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 SLC9A6Q92581 669 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 OR52B2Q96RD2 323 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 OR52E6Q96RD3 313 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 YIPF4Q9BSR8 244 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 CCDC134Q9H6E4 229 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 RMND5AQ9H871 391 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 TRIM33Q9UPN9 1127 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms