RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CHI3L2Q15782 390 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 HLFQ16534 295 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 KNOP1Q1ED39 458 aaKnown RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 PRTGQ2VWP7 1150 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF829Q3KNS6 432 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 FAM74A3Q4VXF1 159 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 CYBRD1Q53TN4 286 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 PXDC1Q5TGL8 231 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 SLX4IPQ5VYV7 408 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 SLC8B1Q6J4K2 584 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF730Q6ZMV8 503 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 Q6ZVQ6 151 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 SFR1Q86XK3 245 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 CD302Q8IX05 232 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 CLEC4FQ8N1N0 589 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 PQLC3Q8N755 202 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 RELL2Q8NC24 303 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 CHDHQ8NE62 594 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 OLIG1Q8TAK6 271 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 MARCH1Q8TCQ1 289 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 ARNTL2Q8WYA1 636 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 ART4Q93070 314 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 C18orf25Q96B23 403 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 SDSLQ96GA7 329 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 ART5Q96L15 291 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 SLC6A7Q99884 636 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 RPP25Q9BUL9 199 aaKnown RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 TRIM62Q9BVG3 475 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 PAPOLGQ9BWT3 736 aaKnown RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 PITPNM3Q9BZ71 974 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 IL26Q9NPH9 171 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 PNO1Q9NRX1 252 aaKnown RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 DCAF13Q9NV06 445 aaKnown RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 NUDT15Q9NV35 164 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 LYARQ9NX58 379 aaKnown RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 MTCH1Q9NZJ7 389 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 CD300AQ9UGN4 299 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 SLC7A8Q9UHI5 535 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 STARD10Q9Y365 291 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 RHBDD3Q9Y3P4 386 aa3.89□□□□□ -1.79
PTCD3-214ENST00000483925 V9GYY5 206 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-214ENST00000483925 IGLV5-37A0A075B6J1 123 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 A0A1W2PPE3 182 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF587BE7ETH6 402 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 CYB561D2O14569 222 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 MSH4O15457 936 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TAPBPO15533 448 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RRP8O43159 456 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 CABYRO75952 493 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 ANGPTL1O95841 491 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 GLUD1P00367 558 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 CALCAP01258 141 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SERPIND1P05546 499 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TPM3P06753 285 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 UMODP07911 640 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 ADORA3P0DMS8 318 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SNHG28P0DPA3 235 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 BCKDHAP12694 445 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 CDH1P12830 882 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 HLA-DOBP13765 273 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TUBG1P23258 451 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 PPP2R1BP30154 601 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RRM2P31350 389 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 YWHABP31946 246 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RORAP35398 523 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 GLUD2P49448 558 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 DUSP3P51452 185 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 NOVA1P51513 510 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RPL27P61353 136 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 IRX3P78415 501 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 XIAPP98170 497 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SLAQ13239 276 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RIGQ13278 110 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 XRCC4Q13426 336 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TRIP6Q15654 476 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SLC15A2Q16348 729 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 KLHL38Q2WGJ6 581 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF260Q3ZCT1 412 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 BEX5Q5H9J7 111 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SPANXN4Q5MJ08 99 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 PDSS1Q5T2R2 415 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SLC25A25Q6KCM7 469 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 ATRAIDQ6UW56 229 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 C6orf89Q6UWU4 347 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 BTNL3Q6UXE8 466 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 Q71RC1 249 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TRIM69Q86WT6 500 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 VRK2Q86Y07 508 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 FBXL16Q8N461 479 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 DHRSXQ8N5I4 330 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 POC1AQ8NBT0 407 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF114Q8NC26 417 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 OR5T3Q8NGG3 340 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 OR4D10Q8NGI6 311 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RHEBL1Q8TAI7 183 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 DTX3LQ8TDB6 740 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 CD300LFQ8TDQ1 290 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 PDCD6IPQ8WUM4 868 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms