RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PAQR5Q9NXK6 330 aaPredicted RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 TAS2R9Q9NYW1 312 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 PCTPQ9UKL6 214 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 KCNS2Q9ULS6 477 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 SNX24Q9Y343 169 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 TNPO3Q9Y5L0 923 aaKnown RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 LOC100289279A0A1B0GTE1 492 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 GOLGA6L6A8MZA4 724 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 LYZL6O75951 148 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 UTS2O95399 124 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 IL33O95760 270 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 IGKV1D-16P01601 117 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 C2P06681 752 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 EDNRAP25101 427 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 TTKP33981 857 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 CLK3P49761 638 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 RAC1P63000 192 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 RAE1P78406 368 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 MRPS25P82663 173 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 SPOCK1Q08629 439 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 ITGADQ13349 1161 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 PPA1Q15181 289 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 RAB35Q15286 201 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 STK11Q15831 433 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 ZNF239Q16600 458 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 DECR1Q16698 335 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 FAM83EQ2M2I3 478 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 GRAMD1BQ3KR37 738 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 TMEM201Q5SNT2 666 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 LIPNQ5VXI9 398 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 FAM166AQ6J272 317 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 B3GLCTQ6Y288 498 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 C3orf62Q6ZUJ4 267 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 ESPNLQ6ZVH7 1005 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 EXOC3L1Q86VI1 746 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 MEX3DQ86XN8 651 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 POC1BQ8TC44 478 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 OSTF1Q92882 214 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 PHF21BQ96EK2 531 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 PRR14Q9BWN1 585 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 SRXN1Q9BYN0 137 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 TBL1XR1Q9BZK7 514 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 CBLN4Q9NTU7 201 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 SENP1Q9P0U3 644 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 KLHL13Q9P2N7 655 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 STOML1Q9UBI4 398 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 DYSFO75923 2080 aa9.62□□□□□ -0.87
SMARCC1-205ENST00000483847 A0A1W2PRB8 838 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 GXYLT2A0PJZ3 443 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 HMX2A2RU54 273 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 NDUFB5O43674 189 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 KLHL2O95198 593 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 CHN1P15882 459 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 ITGA2P17301 1181 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 TSPAN8P19075 237 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 GZMKP49863 264 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 CARD18P57730 90 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 TRA2BP62995 288 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 PRR5P85299 388 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 GGTLC2Q14390 218 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 ACAP2Q15057 778 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 PLPPR5Q32ZL2 321 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 GGTA1PQ4G0N0 100 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 TECRLQ5HYJ1 363 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 TCHHL1Q5QJ38 904 aaPredicted RBP9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 CPTPQ5TA50 214 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 LETMD1Q6P1Q0 360 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 METTL2BQ6P1Q9 378 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 TMEM107Q6UX40 140 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 CYS1Q717R9 158 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 FAM9CQ8IZT9 166 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 GATSQ8NAP1 163 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 SELENOMQ8WWX9 145 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 PROX1Q92786 737 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 KLHL15Q96M94 604 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 ADAM19Q9H013 955 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 BRF2Q9HAW0 419 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 SLC35C2Q9NQQ7 365 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 MED17Q9NVC6 651 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 PRSS50Q9UI38 385 aa9.61□□□□□ -0.87
SMARCC1-205ENST00000483847 A0A087WZY1 265 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 GOLGA8QA0A0J9YX86 632 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 C7orf72A4D263 438 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 GOLGA8OA6NCC3 632 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 VWC2LB2RUY7 222 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 GOLGA8NF8WBI6 632 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 H7C417 338 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 GOLGA8RI6L899 631 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 UPK1AO00322 258 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 EFNA2O43921 213 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 KIAA0513O60268 411 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 COQ9O75208 318 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 PSMG1O95456 288 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 JUNP05412 331 aaKnown RBP9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 SFTPDP35247 375 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 SQLEQ14534 574 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 RNPS1Q15287 305 aaKnown RBP9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 MROH9Q5TGP6 573 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 GTF2IRD2BQ6EKJ0 949 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms