RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 SERPINB5P36952 375 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 MAP3K8P41279 467 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 PRIM2P49643 509 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 IST1P53990 364 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 RPS26P62854 115 aaKnown RBP9.44□□□□□ -0.9
CPSF4-212ENST00000482251 POU6F2P78424 691 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-212ENST00000482251 C17orf67Q0P5P2 114 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 PON3Q15166 354 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 TESK1Q15569 626 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 CD226Q15762 336 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 CPTPQ5TA50 214 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 LRIG3Q6UXM1 1119 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 CDC20BQ86Y33 519 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 KIF18BQ86Y91 864 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 CLEC4FQ8N1N0 589 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 MREGQ8N565 214 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 ZNF614Q8N883 585 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 FNDC9Q8TBE3 224 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 FAM222BQ8WU58 562 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 HOXB13Q92826 284 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-212ENST00000482251 MTERF3Q96E29 417 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 ZFP3Q96NJ6 502 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 PIGQQ9BRB3 760 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 OPN3Q9H1Y3 402 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-212ENST00000482251 ACBD3Q9H3P7 528 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 CCM2LQ9NUG4 571 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-212ENST00000482251 JKAMPQ9P055 326 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 FOXD3Q9UJU5 478 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-212ENST00000482251 MRPS18CQ9Y3D5 142 aaKnown RBP9.44□□□□□ -0.9
CPSF4-212ENST00000482251 SPG11Q96JI7 2443 aa9.44□□□□□ -0.9
CPSF4-212ENST00000482251 AKAP6Q13023 2319 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 TTC36A6NLP5 189 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 ALG1L2C9J202 215 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 SCDO00767 359 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 EIF1AYO14602 144 aaKnown RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 SERPINE1P05121 402 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 DDX5P17844 614 aaKnown RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 BGNP21810 368 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 RPL3P39023 403 aaKnown RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 PEX19P40855 299 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 EIF1AXP47813 144 aaKnown RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 CCT3P49368 545 aaKnown RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 ZNF41P51814 821 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 ABCE1P61221 599 aaKnown RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 SORDQ00796 357 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 PGS1Q32NB8 556 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 NDUFAF6Q330K2 333 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 CDC73Q6P1J9 531 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 GGNQ86UU5 652 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 CLECL1Q8IZS7 167 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 ANKRD42Q8N9B4 389 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 OR5D16Q8NGK9 328 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 OR6Y1Q8NGX8 325 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 GOT1L1Q8NHS2 421 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 ARSGQ96EG1 525 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 RNF145Q96MT1 663 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 ZIM3Q96PE6 472 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 UCN2Q96RP3 112 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 PAIP2Q9BPZ3 127 aaKnown RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 TMEM109Q9BVC6 243 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 BTBD2Q9BX70 525 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 C20orf27Q9GZN8 174 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 MED17Q9NVC6 651 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 ATAD3AQ9NVI7 634 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 NTMQ9P121 344 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 ST6GALNAC2Q9UJ37 374 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 CLEC4AQ9UMR7 237 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 EIF3LQ9Y262 564 aaKnown RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 KCNE3Q9Y6H6 103 aa9.43□□□□□ -0.9
CPSF4-212ENST00000482251 HRNRQ86YZ3 2850 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-212ENST00000482251 UQCRHLA0A096LP55 91 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 IGLV3-32A0A0A0MS00 114 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 SH3D21A4FU49 640 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 TNFSF11O14788 317 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 OIP5O43482 229 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 ZNF500O60304 480 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-212ENST00000482251 AQP8O94778 261 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 NUDT14O95848 222 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 EPXP11678 715 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 PRPS1L1P21108 318 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 TBXA2RP21731 343 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 CCKARP32238 428 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 SLC6A8P48029 635 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 DIO3P55073 304 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 CASP9P55211 416 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 HBA1P69905 142 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 ZNF117Q03924 483 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 FAM27E3Q08E93 113 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 FOXF1Q12946 379 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 MLC1Q15049 377 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 BCL2A1Q16548 175 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 SGCBQ16585 318 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 PLPPR5Q32ZL2 321 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 EXOSC6Q5RKV6 272 aaKnown RBP9.42□□□□□ -0.9
CPSF4-212ENST00000482251 DCST2Q5T1A1 773 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 OR4F3Q6IEY1 312 aa9.42□□□□□ -0.9
CPSF4-212ENST00000482251 OLIG3Q7RTU3 272 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms