RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PRRG4Q9BZD6 226 aa16.91■□□□□ 0.3
ABCF3-214ENST00000480562 KLHL4Q9C0H6 718 aa16.91■□□□□ 0.3
ABCF3-214ENST00000480562 TUBB1Q9H4B7 451 aa16.91■□□□□ 0.3
ABCF3-214ENST00000480562 FBXO34Q9NWN3 711 aa16.91■□□□□ 0.3
ABCF3-214ENST00000480562 SH3BP4Q9P0V3 963 aa16.91■□□□□ 0.3
ABCF3-214ENST00000480562 CLEC4AQ9UMR7 237 aa16.91■□□□□ 0.3
ABCF3-214ENST00000480562 ALG1L2C9J202 215 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 NPIPB8E9PQR5 432 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 AZIN1O14977 448 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 NDUFB5O43674 189 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 SMPD2O60906 423 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 OXSR1O95747 527 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-214ENST00000480562 LINC00032P0C843 101 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 TBXA2RP21731 343 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 MANFP55145 182 aaKnown RBP16.9■□□□□ 0.3
ABCF3-214ENST00000480562 VPS26BQ4G0F5 336 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 RFTN2Q52LD8 501 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-214ENST00000480562 Q5PR19 223 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 P3H2Q8IVL5 708 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 CDRT4Q8N9R6 151 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 SLC16A11Q8NCK7 471 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 CEP70Q8NHQ1 597 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 ZFP28Q8NHY6 868 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 ZBED6CLQ96FA7 236 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-214ENST00000480562 MARK4Q96L34 752 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 FCRL1Q96LA6 429 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 CCT7Q99832 543 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 GATA5Q9BWX5 397 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-214ENST00000480562 ZNF395Q9H8N7 513 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-214ENST00000480562 ARID1AO14497 2285 aa16.9■□□□□ 0.3
ABCF3-214ENST00000480562 ARHGEF9O43307 516 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 KCNK2O95069 426 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 FCGR2AP12318 317 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 KRT4P19013 534 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 LOXP28300 417 aaPredicted RBP16.89■□□□□ 0.29
ABCF3-214ENST00000480562 OCRLQ01968 901 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 ACKR1Q16570 336 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 DUSP5Q16690 384 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.89■□□□□ 0.29
ABCF3-214ENST00000480562 CLEC9AQ6UXN8 241 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 TDRPQ86YL5 185 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 OR10D3Q8NH80 312 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 FAM110BQ8TC76 370 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 PIGTQ969N2 578 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 ZNF764Q96H86 408 aaPredicted RBP16.89■□□□□ 0.29
ABCF3-214ENST00000480562 SH3YL1Q96HL8 342 aaPredicted RBP16.89■□□□□ 0.29
ABCF3-214ENST00000480562 MS4A4EQ96PG1 132 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 KLHDC3Q9BQ90 382 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 TMEM185BQ9H7F4 350 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 NTMQ9P121 344 aa16.89■□□□□ 0.29
ABCF3-214ENST00000480562 A0A087WZY1 265 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 UQCRHLA0A096LP55 91 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 A0A1W2PRB8 838 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 TMEM233B4DJY2 109 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 TBX19O60806 448 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 PLGP00747 810 aaPredicted RBP16.88■□□□□ 0.29
ABCF3-214ENST00000480562 NGFRP08138 427 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 ZNF17P17021 662 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 FRKP42685 505 aaPredicted RBP16.88■□□□□ 0.29
ABCF3-214ENST00000480562 SLC18A2Q05940 514 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 PDE7AQ13946 482 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 PCLAFQ15004 111 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 GALNTL6Q49A17 601 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 CCNJQ5T5M9 372 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 KANK2Q63ZY3 851 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 MFSD12Q6NUT3 480 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 WDR75Q8IWA0 830 aaKnown RBP16.88■□□□□ 0.29
ABCF3-214ENST00000480562 GTPBP8Q8N3Z3 284 aaPredicted RBP16.88■□□□□ 0.29
ABCF3-214ENST00000480562 ADGRG7Q96K78 797 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 RNF145Q96MT1 663 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 CCL19Q99731 98 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 PIP5K1AQ99755 562 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 IQCGQ9H095 443 aaKnown RBP16.88■□□□□ 0.29
ABCF3-214ENST00000480562 ACSS1Q9NUB1 689 aaPredicted RBP16.88■□□□□ 0.29
ABCF3-214ENST00000480562 MED17Q9NVC6 651 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 STOML1Q9UBI4 398 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 EMC9Q9Y3B6 208 aa16.88■□□□□ 0.29
ABCF3-214ENST00000480562 TNFSF11O14788 317 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 LSM1O15116 133 aaKnown RBP16.87■□□□□ 0.29
ABCF3-214ENST00000480562 CXCL13O43927 109 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 TRIM13O60858 407 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 THBDP07204 575 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 ALOX5P09917 674 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 NEFHP12036 1026 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 FPR1P21462 350 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 PSMA4P25789 261 aaKnown RBP16.87■□□□□ 0.29
ABCF3-214ENST00000480562 CTBP2P56545 445 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 CTU2Q2VPK5 515 aaKnown RBP16.87■□□□□ 0.29
ABCF3-214ENST00000480562 PLPPR5Q32ZL2 321 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 LRRC75A-AS1Q8N1F1 130 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 CIARTQ8N365 385 aaPredicted RBP16.87■□□□□ 0.29
ABCF3-214ENST00000480562 COX18Q8N8Q8 333 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 OR6Y1Q8NGX8 325 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 OR6K3Q8NGY3 331 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 JADE3Q92613 823 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 PERPQ96FX8 193 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 GMPPAQ96IJ6 420 aaPredicted RBP16.87■□□□□ 0.29
ABCF3-214ENST00000480562 PLSCR4Q9NRQ2 329 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 DNAJC15Q9Y5T4 150 aa16.87■□□□□ 0.29
ABCF3-214ENST00000480562 NSD1Q96L73 2696 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms