RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 FADS6Q8N9I5 356 aa18■□□□□ 0.47
LIME1-205ENST00000480139 CCDC197Q8NCU1 140 aa18■□□□□ 0.47
LIME1-205ENST00000480139 OR8J3Q8NGG0 315 aa18■□□□□ 0.47
LIME1-205ENST00000480139 SLC38A5Q8WUX1 472 aa18■□□□□ 0.47
LIME1-205ENST00000480139 LRRC58Q96CX6 371 aa18■□□□□ 0.47
LIME1-205ENST00000480139 GNRHR2Q96P88 292 aa18■□□□□ 0.47
LIME1-205ENST00000480139 SH3GL1Q99961 368 aa18■□□□□ 0.47
LIME1-205ENST00000480139 TSPAN10Q9H1Z9 355 aaPredicted RBP18■□□□□ 0.47
LIME1-205ENST00000480139 SLC38A1Q9H2H9 487 aa18■□□□□ 0.47
LIME1-205ENST00000480139 ACKR4Q9NPB9 350 aa18■□□□□ 0.47
LIME1-205ENST00000480139 PPP4R1LQ9P1A2 415 aa18■□□□□ 0.47
LIME1-205ENST00000480139 MKLN1Q9UL63 735 aa18■□□□□ 0.47
LIME1-205ENST00000480139 NPIPA1Q9UND3 350 aa18■□□□□ 0.47
LIME1-205ENST00000480139 DTNAQ9Y4J8 743 aa18■□□□□ 0.47
LIME1-205ENST00000480139 DSPPQ9NZW4 1301 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 C2orf72A6NCS6 295 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 H3BNH8 94 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 UGT2B17O75795 530 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 HPNP05981 417 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 CHRM4P08173 479 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 PLA2G2AP14555 144 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 GDF1P27539 372 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 CRISP3P54108 245 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 GPR68Q15743 365 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 GHDCQ8N2G8 530 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 RCN3Q96D15 328 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 TMEM38AQ9H6F2 299 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 SUCOQ9UBS9 1254 aaKnown RBP17.99■□□□□ 0.47
LIME1-205ENST00000480139 KCNE5Q9UJ90 142 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 MRPS18CQ9Y3D5 142 aaKnown RBP17.99■□□□□ 0.47
LIME1-205ENST00000480139 HRH3Q9Y5N1 445 aa17.99■□□□□ 0.47
LIME1-205ENST00000480139 NPIPA5A0A0B4J1W7 369 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 NPIPA7E9PJI5 369 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 BCHEP06276 602 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 NPIPA8P0DM63 369 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 MSX1P28360 303 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 ADH7P40394 386 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 CHRNEQ04844 493 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 CAPRIN1Q14444 709 aaKnown RBP17.98■□□□□ 0.47
LIME1-205ENST00000480139 SLC10A1Q14973 349 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 IGFBP7Q16270 282 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 GCNT6Q5T4J0 391 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 NANOGP8Q6NSW7 305 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 C10orf111Q8N326 155 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 OR2M3Q8NG83 312 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 DUSP19Q8WTR2 217 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 THUMPD3Q9BV44 507 aaKnown RBP17.98■□□□□ 0.47
LIME1-205ENST00000480139 RUBCNLQ9H714 662 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 KAT8Q9H7Z6 458 aaKnown RBP17.98■□□□□ 0.47
LIME1-205ENST00000480139 MTHFD2LQ9H903 347 aaPredicted RBP17.98■□□□□ 0.47
LIME1-205ENST00000480139 NANOGQ9H9S0 305 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 EFCAB1Q9HAE3 211 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 BCL2L10Q9HD36 194 aa17.98■□□□□ 0.47
LIME1-205ENST00000480139 A0A1B0GVC2 190 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 ANKUB1A6NFN9 424 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 B4DXG7 233 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 NDUFAB1O14561 156 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 SUSD5O60279 629 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 HCN1O60741 890 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 WISP2O76076 250 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 NUDT7P0C024 238 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 ARAFP10398 606 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 RPS4Y1P22090 263 aaKnown RBP17.97■□□□□ 0.47
LIME1-205ENST00000480139 SRD5A2P31213 254 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 MTPNP58546 118 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 GANABQ14697 944 aaKnown RBP17.97■□□□□ 0.47
LIME1-205ENST00000480139 CD226Q15762 336 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 ZNF630Q2M218 657 aaPredicted RBP17.97■□□□□ 0.47
LIME1-205ENST00000480139 PDZK1Q5T2W1 519 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 ARHGAP11AQ6P4F7 1023 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 GFRALQ6UXV0 394 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 HACD2Q6Y1H2 254 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 OLIG3Q7RTU3 272 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 NET1Q7Z628 596 aaPredicted RBP17.97■□□□□ 0.47
LIME1-205ENST00000480139 SERPINA11Q86U17 422 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 OR4K17Q8NGC6 315 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 BCAS4Q8TDM0 211 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 TMEM19Q96HH6 336 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 TREX2Q9BQ50 279 aaPredicted RBP17.97■□□□□ 0.47
LIME1-205ENST00000480139 SLC39A3Q9BRY0 314 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 SPATA9Q9BWV2 254 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 OR2B2Q9GZK3 357 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 DEFB127Q9H1M4 99 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 PTGES2Q9H7Z7 377 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 FBXL2Q9UKC9 423 aa17.97■□□□□ 0.47
LIME1-205ENST00000480139 C15orf38-AP3S2A0A0A6YYH1 394 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 A0A0G2JPF8 293 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 SERINC4A6NH21 518 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 AGAP5A6NIR3 686 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 C17orf51A8MQB3 221 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 HNRNPCL2B2RXH8 293 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 HNRNPCL3B7ZW38 293 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 HNRNPCL1O60812 293 aaKnown RBP17.96■□□□□ 0.47
LIME1-205ENST00000480139 CELA3AP09093 270 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 HNRNPCL4P0DMR1 293 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 DSCR4P56555 118 aaPredicted RBP17.96■□□□□ 0.47
LIME1-205ENST00000480139 RBBP4Q09028 425 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 SELPLGQ14242 412 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 FGFBP1Q14512 234 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 ADRM1Q16186 407 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms