RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 A0A1B0GUS0 222 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 CIB4A0PJX0 185 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 NPEPPSL1A6NEC2 478 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 GOLGA6L10A6NI86 522 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 SDR42E2A6NKP2 422 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 GOLGA6L19H0YKK7 550 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 J3QLI3 93 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 AP3B1O00203 1094 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 NME6O75414 186 aaPredicted RBP10.3□□□□□ -0.76
USP11-208ENST00000480104 ERCC1P07992 297 aaPredicted RBP10.3□□□□□ -0.76
USP11-208ENST00000480104 OR4A8P0C604 315 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 PCNAP12004 261 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 CPMP14384 443 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 CASP2P42575 452 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 EMDP50402 254 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 XKP51811 444 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 OASLQ15646 514 aaKnown RBP10.3□□□□□ -0.76
USP11-208ENST00000480104 ADIPOQQ15848 244 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 TAF9Q16594 264 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 PRICKLE4Q2TBC4 344 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 SASS6Q6UVJ0 657 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 FCRLAQ7L513 359 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 RNF175Q8N4F7 328 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 UHMK1Q8TAS1 419 aaKnown RBP10.3□□□□□ -0.76
USP11-208ENST00000480104 DUSP19Q8WTR2 217 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 RGMAQ96B86 450 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 IQCDQ96DY2 449 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 WDR34Q96EX3 536 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 ZNF48Q96MX3 618 aaPredicted RBP10.3□□□□□ -0.76
USP11-208ENST00000480104 CXorf36Q9H7Y0 433 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 FN3KRPQ9HA64 309 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 BEX1Q9HBH7 125 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 CA10Q9NS85 328 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 FLRT3Q9NZU0 649 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 OPN4Q9UHM6 478 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 ZNF639Q9UID6 485 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 STAB2Q8WWQ8 2551 aa10.3□□□□□ -0.76
USP11-208ENST00000480104 A0A0A6YYD5 115 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 ZCWPW2A0A1B0GU75 182 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 CLDN34H7C241 214 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 FADS1O60427 444 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 KERAO60938 352 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 PRKD3O94806 890 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 FAM58BPP0C7Q3 252 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 CT45A8P0DMV1 189 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 CT45A9P0DMV2 189 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 SHC1P29353 583 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 GPR6P46095 362 aaPredicted RBP10.29□□□□□ -0.76
USP11-208ENST00000480104 HNMTP50135 292 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 RAC1P63000 192 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 BASP1P80723 227 aaKnown RBP10.29□□□□□ -0.76
USP11-208ENST00000480104 PDAP1Q13442 181 aaKnown RBP10.29□□□□□ -0.76
USP11-208ENST00000480104 EFNB3Q15768 340 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 CT45A2Q5DJT8 189 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 TCHHL1Q5QJ38 904 aaPredicted RBP10.29□□□□□ -0.76
USP11-208ENST00000480104 PDSS1Q5T2R2 415 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 SAXO2Q658L1 398 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 OLFML2AQ68BL7 652 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 NPSR1Q6W5P4 371 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 GTPBP8Q8N3Z3 284 aaPredicted RBP10.29□□□□□ -0.76
USP11-208ENST00000480104 OR4K14Q8NGD5 310 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 GTF3AQ92664 365 aaKnown RBP10.29□□□□□ -0.76
USP11-208ENST00000480104 CMTM7Q96FZ5 175 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 KLHL15Q96M94 604 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 SERPINB12Q96P63 405 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 CHP1Q99653 195 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 CAPS2Q9BXY5 557 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 ZNF717Q9BY31 904 aaPredicted RBP10.29□□□□□ -0.76
USP11-208ENST00000480104 PAK5Q9P286 719 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 ZNF69Q9UC07 566 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 PRODH2Q9UF12 536 aa10.29□□□□□ -0.76
USP11-208ENST00000480104 C9JVG2 144 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 FRS3O43559 492 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 MPZL1O95297 269 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 IGHV3-9P01782 118 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 PORP16435 677 aaPredicted RBP10.28□□□□□ -0.76
USP11-208ENST00000480104 ME2P23368 584 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 PSMA4P25789 261 aaKnown RBP10.28□□□□□ -0.76
USP11-208ENST00000480104 SFTPDP35247 375 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 PNLIPRP2P54317 469 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 RAG2P55895 527 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 RAB10P61026 200 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 SLC25A3Q00325 362 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 CDKL1Q00532 357 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 HIST2H2ACQ16777 129 aaPredicted RBP10.28□□□□□ -0.76
USP11-208ENST00000480104 FBXO48Q5FWF7 155 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 PAGE2BQ5JRK9 111 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 DCAF12L2Q5VW00 463 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 HIST2H2AA3Q6FI13 130 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 VHLLQ6RSH7 139 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 BCL6BQ8N143 479 aaPredicted RBP10.28□□□□□ -0.76
USP11-208ENST00000480104 WDR31Q8NA23 367 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 OR4F5Q8NH21 305 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 CPNE4Q96A23 557 aaPredicted RBP10.28□□□□□ -0.76
USP11-208ENST00000480104 ZNF775Q96BV0 537 aaPredicted RBP10.28□□□□□ -0.76
USP11-208ENST00000480104 CCDC42Q96M95 316 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 RNF145Q96MT1 663 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 TSGA10Q9BZW7 698 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 BCO1Q9HAY6 547 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 SAYSD1Q9NPB0 183 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms