RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 LSMEM2Q8N112 164 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 RSC1A1Q92681 617 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SCAMP4Q969E2 229 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ZBTB8AQ96BR9 441 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ZNF419Q96HQ0 510 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 NAA11Q9BSU3 229 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 DNTTIP1Q9H147 329 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ENY2Q9NPA8 101 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SACM1LQ9NTJ5 587 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ACTR10Q9NZ32 417 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 NDRG4Q9ULP0 352 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ZNF41P51814 821 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 Q499Y3 187 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 TMEM164Q5U3C3 297 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SFRP4Q6FHJ7 346 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 CMIPQ8IY22 773 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 IGSF8Q969P0 613 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 LYSMD1Q96S90 227 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 MED18Q9BUE0 208 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR52D1Q9H346 318 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 AGAP14A8MT82 685 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ARHGAP33O14559 1287 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 LILRB3O75022 631 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR2F2O95006 317 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 KCNK2O95069 426 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 CSF3P09919 207 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SLURP2P0DP57 97 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 LUMP51884 338 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 HCCSP53701 268 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 TAS2R46P59540 309 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 NKX6-1P78426 367 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR2F1Q13607 317 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 UAP1L1Q3KQV9 507 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ZNF546Q86UE3 836 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 KLHDC8AQ8IYD2 350 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR6M1Q8NGM8 313 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 GRHL3Q8TE85 626 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ZDHHC12Q96GR4 267 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 BEX2Q9BXY8 128 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 EIF5A2Q9GZV4 153 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SEC61A2Q9H9S3 476 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 PPP4R1LQ9P1A2 415 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 CD84Q9UIB8 345 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 RFXAPO00287 272 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 TAAR5O14804 337 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SDC3O75056 442 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ZNF780AO75290 641 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 FUCA1P04066 466 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 TCRBP04435 133 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 HMGN2P05204 90 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ALAS2P22557 587 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 TCEA1P23193 301 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 HOXA11P31270 313 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 RGS19P49795 217 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 TPMTP51580 245 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 PIGFQ07326 219 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 CCSAPQ6IQ19 270 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ZNF585AQ6P3V2 769 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 RNF165Q6ZSG1 346 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ZNF551Q7Z340 670 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 B3GNT8Q7Z7M8 397 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 GKN2Q86XP6 184 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 COMMD1Q8N668 190 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR6C4Q8NGE1 309 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR5W2Q8NH69 310 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 FAM174AQ8TBP5 190 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SPHK2Q9NRA0 654 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 RASD1Q9Y272 281 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR1A2Q9Y585 309 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ANKRD34BA5PLL1 514 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 MROH6A6NGR9 719 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 TRIM64BA6NI03 449 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SNRPGP15A8MWD9 76 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 A8MXE2 369 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ADAM12O43184 909 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SFTPBP07988 381 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 HBQ1P09105 142 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 IFNGR1P15260 489 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 FKBP2P26885 142 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ADRA1AP35348 466 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 ALDH3B1P43353 468 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 CEBPGP53567 150 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 MGAT3Q09327 533 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 FGL2Q14314 439 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 EML3Q32P44 896 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 PCGF3Q3KNV8 242 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OTUD1Q5VV17 481 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 MLIPQ5VWP3 458 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 PLBD1Q6P4A8 553 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 CD300LGQ6UXG3 332 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 SLC16A9Q7RTY1 509 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 CACUL1Q86Y37 369 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 NKAIN3Q8N8D7 197 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR56B2PQ8NGI1 322 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 OR1J2Q8NGS2 313 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 KCNG3Q8TAE7 436 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 KHSRPQ92945 711 aaKnown RBP eCLIP5.8□□□□□ -1.483e-8■■■□□ 18.9
PRPF4B-205ENST00000480058 PDXPQ96GD0 296 aa5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 TRMT2BQ96GJ1 504 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-205ENST00000480058 F2RL3Q96RI0 385 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms